Anolis carolinensis (green anole): 100555956
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Entry
100555956 CDS
T01608
Symbol
smarcc1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100555956 (smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acs03021
]
100555956 (smarcc1)
03036 Chromosome and associated proteins [BR:
acs03036
]
100555956 (smarcc1)
Transcription machinery [BR:
acs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100555956 (smarcc1)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100555956 (smarcc1)
PBAF complex
100555956 (smarcc1)
GBAF(ncBAF) complex
100555956 (smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT_2
Motif
Other DBs
NCBI-GeneID:
100555956
NCBI-ProteinID:
XP_008120144
Ensembl:
ENSACAG00000010345
LinkDB
All DBs
Position
Un
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AA seq
1317 aa
AA seq
DB search
MSAVAAATLDGLDSLSCFRHWPLEPGNFYEAKAGEGVLGPSCKASGGVSAVQAEEEEEQS
RHQNPPPGGSRHLAELSAAAPAMYEDESAIDFSSYIDSMAAAVPTLELCHDELFADLFNS
NHHGKAAAAGEYLHPAPPPPPGLLLQASVPPGPLRGAVKQEPDWGELAPDSLLPSQIAAC
AQTVVSLSGQPTPPASPEPAPGSASPSSYSSRSSSSSSSSSGPPAAVSRRKDGGPAGKFW
ESPDTAAQLDAARLWLGKHCKKYVQADAPTNKTLAGLVMQLLQFQEDAFGKHVANPAFTK
FPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNN
CLSRPTIYLVPDIELKLANKLKDIVKRHQGTVTDDKSKATHHVYPVPTSLDEEEWFRPVL
KKDKQVLVHWGYYPDSYDTWVHATDVEAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEE
DYEVDENKKPVSFRQRIYMKNEEPVRSPERRDRKATVGARKRKHSPSPPPPPPTPVESRK
KAGKKGQTGLYGKRRGQREDDEQEDLTKDMEDPTPVPNMEEVVLPKNVNPKKDSENTPVK
GGTVADLDEQDEETVATGGKEDEDPNRGDQSRSIDTGEDNVTEQTNHIIIPSYASWFDYN
CIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCA
VMRVHAFLEQWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHLRTPQIPASQQ
MLNFPEKNKEKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDD
WNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAF
LASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARISGKVDPSYGLESSC
IAGTAPDEPEKFDGAEQEKMETETEGPQADKIKVENKGDNEAGDGNKAQEAEEERSAEKE
QDGEATQDSKTDEKEAEENKENLDVCKDKEGDAGKKRVEHEISEGNVATAAAAALASAAT
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER
QNFHMEQLKYAELRARQQMEQQQHSQNAQQQSHQHPVGPGMNPLGTGSHPGLASHPQPPP
YAMMHHPMPPPHPPQTGQILGPSSMMAGQPLPGRIMPSATAGASSTHPATTTTTSSSSNT
STASSASGTAAGNVAGPRGAMASPNGLYPPPAQQPPPPPADGATPPPAAAPVASAAP
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgtggccgcagccaccctggacggcttggactcgctctcctgcttccgccac
tggccgctggagccgggcaacttctacgaggccaaggcgggcgagggggtgctgggcccc
tcctgcaaggcctcgggcggcgtgagcgcggtgcaggcggaggaggaggaggagcagtcc
cggcaccagaaccctcctccgggcggcagccggcacttggcggagctgagcgccgccgcg
cccgcgatgtacgaggacgagagcgccatcgacttcagctcctacatcgactccatggcg
gcggcggtgcccactctggagctgtgccacgacgagctcttcgcggacctcttcaacagc
aaccaccacggcaaggcggcggcggcgggcgagtacctccaccccgctccccctcctcct
ccggggctgctcctccaggccagcgtgcccccggggcccctccgcggcgccgtcaagcag
gagcccgactggggcgagctggcccccgactcgctcctgccctcgcagatcgccgcctgc
gcccagaccgtggtcagcctcagcgggcagcccacgccgcccgcctctccggagcccgcc
ccgggcagcgcctcgccgtccagctacagcagccgctcctcctcgtcctcgtcgtcctcc
tcgggccctccggcggccgtgtcgaggcgcaaggacggcggcccggcggggaagttctgg
gagagccccgacaccgcggcccagctcgacgccgcccggctctggctcgggaagcactgc
aagaagtatgttcaggcagatgctcctaccaataaaacactggcggggcttgtgatgcag
ctgctgcagtttcaggaagatgccttcggaaaacatgtcgccaatcctgccttcacaaaa
ttccctgcaaagtgcttcatggatttcaaagctggcggtacgctgtgccacattcttggt
gctgcttataagtataagaatgagcaaggatggcggaggtttgacttgcagaatccttcc
cggatggatcgaaatgtagaaatgtttatgaacattgaaaaaacattagtgcagaataac
tgtctgagcaggccgaccatctacctcgttccagatatagagctcaagttggccaataag
ctaaaagacattgtgaaacgtcaccagggaaccgtcactgatgacaagtctaaagccacc
caccatgtttatcctgttcctacctcattggatgaagaagagtggttcagacctgtgttg
aagaaagacaagcaggtccttgtgcactggggctattaccctgacagctacgacacttgg
gttcatgctactgatgtggaggcggaaattgaagatcctcccattccagaaaagccctgg
aaggtccatgccaaatggattctggacacagatgtcttcaacgaatggatgaacgaagaa
gattacgaggtcgatgagaacaagaagccggtgagctttcgccagcggatctatatgaaa
aatgaagaaccagttcgtagcccagaacggcgcgatcggaaggcaacggttggggccagg
aaaaggaagcactccccttccccgccgccacctcctcccactccagtggaatccaggaag
aaagctgggaagaaggggcaaacaggcctttatgggaagaggaggggtcagcgggaggac
gatgagcaggaagacctcaccaaggacatggaggaccccacccctgtgccgaacatggag
gaagtggtgctccccaaaaacgtaaacccaaagaaagatagcgaaaacactccagtgaaa
ggagggacggttgcagaccttgatgagcaggatgaggagacggtggctacaggaggaaag
gaagatgaagatcccaacagaggtgaccagagccgctccatcgacacgggagaagacaat
gtcacagagcagacaaatcacatcattatccccagctatgcctcctggttcgattataac
tgcatccacgtgattgaacgccgcgctcttccagagttcttcaatgggaagaacaagtct
aagaccccggagatatacttggcctaccgcaatttcatgatcgatacctaccgcctgaac
cctcaggagtacctgaccagcacagcctgcaggaggaacttgaccggagatgtttgtgct
gtaatgagggtgcatgccttcctggagcagtgggggctcataaattaccaggtggacccc
gaaagccgtcccatggccatgggcccccctcccaccccacacttcaacgtcttggcggac
actccctcggggctcatgccgctgcatctgcgcacacctcagatcccagcctcccagcag
atgttgaattttcctgagaagaacaaggagaaacctactgacctgcagaactttgggctt
cgtacagacatctactccaagaaaacattagcaaagagcaaaggtgccagcgctggacgc
gaatggacagagcaggagacactgctgctgcttgaggccctggagatgtacaaagacgac
tggaacaaggtttcggagcacgtgggcagccgcacccaggacgagtgcatcctgcacttc
ctgcgcctccccatcgaggacccttacctggagaactcggacgcctccctggggcccttg
gcctaccagccggtgcctttcagccagtcggggaaccccgtgatgagcaccgtggccttc
ctggcctccgtggtggacccccgcgtggcctcggctgccgccaaagctgctttagaggag
ttttcccgggtgcgagaagaggtgccgctggagctggtggaggcccacgtcaagaaagtc
caagaggcagccaggatctctgggaaagtggatccctcctatggcctggagagcagctgc
attgcagggaccgcgccagacgagccggagaaattcgatggagctgagcaagaaaagatg
gagacagagacggagggaccgcaggcggacaaaatcaaggtagaaaacaaaggagataat
gaagcaggagatggaaacaaagcccaggaagcggaggaggagagaagtgccgaaaaggaa
caggacggggaagccactcaggactctaagacagatgagaaggaggccgaagagaacaag
gagaaccttgatgtctgcaaagacaaggagggcgacgctgggaagaagcgagtggagcac
gaaatctccgaagggaacgtggccacggccgcagctgccgctcttgcctccgctgccacc
aaagccaagcatcttgctgccgtcgaggagaggaagatcaagtccttggtggccctcctg
gttgagacacagatgaagaagctggagatcaaactccgccatttcgaggagctggaaacc
atcatggacagagagaaagaggcgctggagcagcagaggcagcagctgctgacggagcgc
cagaacttccacatggagcagctgaagtacgcggagctgcgcgcccggcagcagatggag
cagcagcagcacagccagaacgcgcagcagcagtcgcaccagcaccccgttgggcccggc
atgaatcccctggggaccggcagccaccccggtttggcctcccacccgcagccgccgccc
tacgccatgatgcaccaccccatgccccctcctcacccgccgcagacaggtcaaatcctt
gggccgagctccatgatggccgggcagcccctgccgggacggatcatgcccagcgccacc
gccggagcctccagcacccaccctgccaccaccaccaccaccagcagctccagcaacacc
agcacagccagctctgcttctgggacggcagccggaaacgtggcagggcctcgaggagcc
atggcctccccaaacggcctgtatccgcctccagcccagcagcctcctcctcctccagct
gacggggccactccacctcctgctgcagccccagtggcctctgcggccccctga
DBGET
integrated database retrieval system
