Anolis carolinensis (green anole): 100556108
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Entry
100556108 CDS
T01608
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03022
Basal transcription factors
acs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100556108 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
100556108 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acs03021
]
100556108 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
acs03400
]
100556108 (gtf2h4)
Transcription machinery [BR:
acs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100556108 (gtf2h4)
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100556108 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
100556108
NCBI-ProteinID:
XP_003217968
Ensembl:
ENSACAG00000010258
UniProt:
G1KK03
LinkDB
All DBs
Position
2:complement(191531728..191552641)
Genome browser
AA seq
460 aa
AA seq
DB search
MESVMKLQKVHLKCKNLHEFLRGLSPGVLDRLYNHPATCLAVFRELPGLAKNYVMRMLLL
EQPLPQAAVASWVKKEYTKEQEESSDILLGLRLWHKQLLPGGLQGIVLNPIFKENLRVAL
LGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVILDFMVGSPSAAVSQDLAQLLTEA
GLMKSSEPGEPPCITSSGFQFLLLDTSSQLWYFMLQYLQSAETRGMDLVEILSFLFQLSF
STLGKDYSVEGMSESLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGISGITIDTR
NQGFIIVETNYRIYAYTDSELQIALIALFSEMLYRFPNLVVAQVTRESVQQAIANGITAD
QIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFELLR
DHARELGVLIFENPSKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggtgatgaagctccagaaggtgcacttgaaatgcaagaacctgcacgaattc
ctgcgaggcctcagccccggggtcttggaccgtctctacaatcaccccgctacttgcctg
gctgtcttccgagagctgccaggcttggccaagaactatgttatgcggatgctgcttttg
gaacagcctcttcctcaggctgctgtggcatcatgggtaaaaaaggaatacactaaggaa
caggaggagagctcagatatcttgctgggtcttcggctgtggcacaagcagttgcttcca
gggggtctccaaggaattgtcttgaaccctatcttcaaggagaacttgcgtgttgccctg
ctgggaggtggtaaggcctggtctgatgacactagccagttaggaccagacaagcatgcc
cgggacgtcccatctctagacaaatatgctgaagaaaggtgggaggtcatcttggacttt
atggtgggctctcctagtgcagccgtgagtcaagatttggctcagctgctcactgaagct
ggcctgatgaagagtagtgagcctggcgaaccaccttgcattacctcttctggtttccag
ttcctcttgctagatacctcatcacaactctggtactttatgttgcagtacctccagtca
gctgagacccggggcatggacctggtggagattctttccttcctcttccagctcagcttc
tccactcttggcaaggattattccgtggaaggaatgagtgaatctttgctaaactttctc
caacacctccgggagtttggtcttgtctttcagagaaagaggaaatccaggcgttactat
ccaacccgcctagcaatcaacctttcctctggcatttcgggtattacgatagatactcgt
aaccagggctttatcattgtggagacaaactacaggatctatgcatacacagattctgag
ctgcagattgcactcattgccctcttctctgagatgttgtatcgctttccaaacttagtg
gtggctcaagtaacccgggagagtgtacaacaggcgattgccaatggcatcacagcagat
cagataattcacttcctgcgtactagagctcaccctgtgatgctgaaacagacccctgtg
ctgccccccacaatcacagaccaaatccggctatgggagctggaacgggacagattgcgc
ttctctgagggtgttctctacaaccagttcctctcccaggtggactttgagctgctgcgg
gaccatgccagggaactcggggtgctcatttttgagaacccttccaagcgtctgatggtg
gtgactcctgccggacactcagatgtcaaacgcttctggaagcgacagaaacacagttcc
tga
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