Anolis carolinensis (green anole): 100556448
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Entry
100556448 CDS
T01608
Symbol
cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100556448 (cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100556448 (cnot6l)
Enzymes [BR:
acs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100556448 (cnot6l)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100556448 (cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100556448 (cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
100556448
NCBI-ProteinID:
XP_008110344
Ensembl:
ENSACAG00000012099
LinkDB
All DBs
Position
5:146041608..146092729
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AA seq
550 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEIANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NYLTRIPPDIAKLQNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDSDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ
YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGLKPLHTLDNQLLIVANAHMHWDP
EYSDVKLVQTMMFVSELKSILEKASGRPGSPTADTNSIPLVLCADLNSLPDSGVVEYLSN
GIVADNHKDFKELRYNDCLVNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFK
GVIDYIFYSNTHMNVLGVLGPLDPQWLVENSITGCPHPHIPSDHFSLLTQLELHPPFLPP
LNGIHLPARR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgaccctccagatcctcgcagaatttacaccatcatgtcagca
gaggagatagccaatgggaagaagtcccattgggcagaattggaaatctcgggtagagtg
cggagcttaagtacatcactttggtcgctaacgcacttgactgctctccacctcaatgac
aattatctgactcgcattccgcctgatatcgccaagcttcaaaatctggtttacctggat
ctctcatccaacaaactcagaagtttaccagcagaactaggaaacatggtatctctcagg
gaattgcttttaaacaacaatttgttacgagttttgccttatgaacttggacggctcttc
cagctgcagacactaggtttgaaaggcaatcctttatcacaagatattctcagcctgtac
caggactcagatgggacacggaaattattgaactacatgcttgacaatctagcagttcat
ccagaacaactgcctccaaggccatggattacattaaaagaaagagaccaaattttgccc
tcagcttcgtttactgtcatgtgctacaatgtgttgtgtgataaatatgccactcgacag
ctctacggctattgcccgtcctgggcattaaactgggaatacagaaaaaagggaataatg
gaagaaattgtaaactgggatgcagatatcattagccttcaggaagtagaaactgagcaa
tacttcaccctctttttgccagcattgaaagatcgtggatacgatggatttttctctcca
aagtcacgtgccaaaatcatgtctgagcaagagcgaaagcatgtggatggttgtgcaata
ttcttcaaaacagaaaaattcacattggtgcagaagcatacagtcgagttcaaccaagtg
gcaatggcaaactctgaaggttcggaagctatgctgaacagagtaatgacaaaggacaac
attggagttgctgtagtgttagaggtgcataaagaactgtttggggcaggtttgaagccc
cttcataccttggacaaccaactccttattgtagcaaatgcccatatgcattgggaccct
gaatattctgatgtaaaacttgtccaaaccatgatgtttgtctctgagctgaaaagcatt
cttgagaaagcctctggtaggcccggaagcccaacagcagatacgaattccatccctctg
gtgctgtgtgcagatctgaactcgttgcctgattcaggtgttgtggaatacttaagtaat
ggaatagttgctgataaccataaagacttcaaggagttacgatataatgattgtctcgtg
aacttcagcggcaatggaaagaatggggcttctgagggaagaatcactcacggcttccaa
ctcaagagcgcctatgaaaacaatttgatgccttatactaattacacctttgatttcaaa
ggtgtgattgactacattttttattccaacactcacatgaacgtgcttggtgtcctgggg
cctttggaccctcagtggctggtggagaacagcatcaccgggtgcccccacccccacatc
ccctcagaccacttttcactgttgacgcagctggagctccaccctcccttcctgcctccc
ctcaatggcatccacttgccggccaggaggtag
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