Anolis carolinensis (green anole): 100556487
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Entry
100556487 CDS
T01608
Symbol
clp1
Name
(RefSeq) cleavage and polyadenylation factor I subunit 1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100556487 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100556487 (clp1)
Enzymes [BR:
acs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100556487 (clp1)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100556487 (clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_18
MMR_HSR1
ATP_bind_1
TniB
AAA_22
AAA_16
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100556487
NCBI-ProteinID:
XP_003215008
Ensembl:
ENSACAG00000007139
UniProt:
G1KG72
LinkDB
All DBs
Position
1:complement(91587977..91597065)
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AA seq
425 aa
AA seq
DB search
MTEETGDEKKFVAKFELERETELRFEVEASQIVQLELMTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLTGRTEVAYVSKDTPMLLYLNTHTALEQMRWQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREFRDER
IREYFYGFRGCFYPHAFDVKFCDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGTDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaaactggggatgaaaagaaattcgtagccaagtttgaactggaaagggag
acagagctccgtttcgaggttgaagcttcacaaattgtccagctggagcttatgacaggc
atggcagagatctttggcactgaactgacacgcaacaagaaattcacctttgatgcaggc
gcaaaagtggctgtgttcacctggcatggctgttcagtgcagctgactggccggactgaa
gtagcctatgtttctaaagacactcccatgctgttgtacctcaatacccacaccgctctg
gagcagatgcgatggcaggcagagcgtgaagatgaaagggggcctcgggttatggtggtg
ggtcccacagatgtagggaagtcaactgtctgccgcctgctcctgaattatgctgtccgg
ctgggccgccgacccacttttgtggagttggatgtaggccaaggctcgatctctatccca
ggcacaatgggggcactctatattgagcgacctgcagatgtcgaagaaggattctcagtt
caggcccctctggtctatcactttgggtctacaacacctggaacaaacatcaagctctac
aacaaaattacatctcgcttggctgatgtatttaaccagcgctgcgaggtgaaccgccgt
gcttcagtcagtggctgtgtcatcaatacctgtggctgggtgaaggggtctggataccag
gcacttgttcatgctgcttccgcctttgaagttgatgttgtagtggtgctggatcaagag
cgcctttacaatgaactgaagcgagatttgcctcattttgtccggacagtgctgctcccc
aagtctggtggagtggtggagcgttccaaggacttccggcgagagttccgtgatgagcgc
atacgtgaatatttctatggtttccgagggtgcttctacccccatgcctttgatgtcaag
ttctgcgatgtgaagatatacaaggtgggagctcccaccatcccggattcatgcctgccc
ctgggcatgtcccaagaggacaaccagctaaagctagtaccagttacacctggccgtgac
atggtacaccacctattaagtgtgagtactgctgatggcaccgatgagaacatttctgag
acgagtgtggctggtttcattgtagtcactggagtggatcttgaacggcaggtcttcaca
gtgctttcaccagcacctcggccattgcccaagaacttcttgctcatcatggacattcgt
ttcatggatctcaaatag
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