Anolis carolinensis (green anole): 100557081
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Entry
100557081 CDS
T01608
Symbol
abca1
Name
(RefSeq) ATP binding cassette subfamily A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs02010
ABC transporters
acs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100557081 (abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100557081 (abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acs02000
]
100557081 (abca1)
Transporters [BR:
acs02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100557081 (abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
100557081
NCBI-ProteinID:
XP_008101905
Ensembl:
ENSACAG00000014282
UniProt:
G1KQ95
LinkDB
All DBs
Position
2:complement(75533609..75692006)
Genome browser
AA seq
2258 aa
AA seq
DB search
MAFWTQLGLLLWKNFTFRRRQTFQLLIEVAWPLFLFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGIVGNFNKSIVYRLFSDAKRLLLYSQKDT
SMKDAQKVVMKLQKIGKTVTGLKVRDFLVANETFSSFLYHNASLPQFVVDEILNAEVNLQ
QVIKSGYQMSVKDLCNSTKLSEIVVIQNPWIDAVSNAVICSMPKEKLTVAEKVFQDNLDV
MKPVLKGIASNSTLQDLKGTVETLMGSLGDLLRELVSMKSWSDMRQEVKFLTNVNATSSS
AEIYQAVSRIVCGHPEGGGLQIKSLNWYEDNNYKAFFGSNSTEDEAADFYDNSTTPYCND
LMKKLESSPLSKIIWRALKPLLVGKVLYTPDTPATRAVMSEVNKTFQELGVFRDLGGMWE
EIRPKIKAFMEKSSEMDLVRTLLQNKFYWKKHLMGSDWTMEDVALFLAKNPEDIHAVNGS
TYTWRDAFNETDYAVMTISRFMECVNLDKLEAVPSEVRLINKSMQLLDQRRFWAAIVFPE
IAPRSAKLPQHVKYKIRMDIDSVERTNKIKDEYWDPGPRADPFDDMRYIWGGFAYLQDVI
EQAIIRTLTGSEKKMGVYVQQMPYPCYVDDIYLRITSKSMPLFMTLAWIYSVAIIIKGIV
YEKEARLKETMRIMGLDNGILWLSWFISSFIPLLMSAGLLTVILKKGNLLPYSDPSVVFG
FLSIFGVVTIMQCFLISTLFSRANLAAACGGIIYFTFYLPFVLCVAWQDYISFSLKIFAS
LLSPVAFGYGCEHLSLLEEQGIGVQWDNIFESPREEDSFNLTTSVSMMLVDSLLYGIMTW
YIEAVFPGQFGIPRPWYFPFMKSYWCGEKSKEGQIPSLSEKSSEICMEEEPSHLRLGVSI
QKLVKVYRDGKKLAIDGLTLNFYEGQISSFLGHNGAGKTTTMSILTGLFPPTSGTAFILG
KDIRTELSTIRQNLGVCPQHNVLFDELTVEEHIWFYARLKGLSAKLVKKEMEQMAIDVGL
PHKLKSKTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGR
TIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSC
RNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIMKHVPEARLVEDIGH
ELTYVLPYEAAREGAFVELFHEIDDRLSDLRISSYGISETTLEEIFLKVAEDNGVDAETS
DGTLPARRSRVFGDRQSCLRPFTEDDAFDTNDSDIDPESRETDLLSGMDGKGSTQVKGWK
LTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALLFSLIVPPFGKYPSLELQPWM
YDEQYTFISNDAPDDTGTQKLLDALLSKPGFGTRCMKGYSIEDTPCSVGEEDWTTASVPK
TVMEILQKDNWTMENPSPCCICSSETIKKILPLCPAGAGGLPPPQRVQNTTDILQNLTGR
NISDYLVKTYAQIIEKSLKNKIRVNEFRYGGFSLGASSSLVLPRREEVSEAIQQVKKLLE
ITKDSSAERFLNSLASFMKGMDTKDNVKVWFNNKGWHAVGAFLNVMNNAILRANLQDGEN
PSAYGITAYNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSK
AKHLQFISGVKPVIYWLANFVWDMCNYVVPATLVIIIFICFQQKSYVSSSNLPVLALLLL
LYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDIL
KSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGAVF
FLITLLIQYRFFIKPRPIYAKLPPVSEEDEDVNRERQRIIGGGGQSDILEIKELTKIYRM
KRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGDAFLKGNSILSNIQE
VHQNMGYCPQFDAINELLTGREHLEFFALLRGVSVKEVCKVGEWAVRKLGLVKYAEKYAG
TYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKQGRSVVLTSHS
MEECEALCTRMAIMVNGQFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQDFFQQAF
PGSVLKEKHRNMLQYQLPSSLSSLARIFSILSNNKKRLHIEDYSVSQTTLDQVFVNFAKD
QSDDDHTKDLSLHKNQTVVDVAMLTSFLQDEKVKESYV
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atggccttctggacacagttgggtttgctgctatggaagaatttcacctttaggagacgg
caaacgttccagctgctaattgaggttgcttggcctttgtttctcttcttcatattgatt
tcggtgcgtctctcctatccaccttatgaacaacatgaatgccatttccccaacaaggcc
atgccttcagctggaacattgccctgggtacaggggattatctgtaatgccaacaatcct
tgcttccgctacccaacacctggggagtcaccaggcattgtggggaatttcaacaagtct
attgtttaccggttgttctcggatgccaaacgcttactcttgtacagccagaaagatacc
agcatgaaggatgcgcagaaagttgtgatgaaactgcagaaaattgggaaaactgttaca
gggttgaaagtccgggatttcctggttgccaacgagaccttctctagcttcctgtatcac
aatgcttccttaccacagtttgttgtagatgaaatcctgaatgctgaggtcaacctccaa
caggtcatcaagtctggctaccagatgagtgtgaaagacctttgtaattcaaccaagctg
tcagagattgtcgtcatccaaaacccatggatagatgcggtcagtaatgctgtgatttgc
tccatgcctaaggagaaactgaccgtggcagagaaagtgtttcaggataatttggatgtc
atgaagccggttctgaaggggatcgcctccaattcaactttgcaggatcttaaaggaact
gtggagacgttgatggggagccttggagaccttcttagagagttggtgagcatgaaaagc
tggagtgacatgagacaggaggtgaagttcctgaccaacgtgaatgccaccagttcttct
gccgaaatttaccaggcagtgtcccgaattgtttgcggccatcctgagggaggcggattg
cagatcaagtctctcaactggtatgaagacaacaattacaaagctttctttggaagtaac
agtactgaagatgaggcagctgatttctacgataattctaccacaccctactgcaatgac
ctaatgaagaaactggaatccagcccactttccaagattatatggagagctctgaaacct
ttgcttgttggcaaagtcttgtacaccccagacacaccagcaacaagggcagtcatgtct
gaggtaaacaagacgttccaggagcttggtgtcttccgtgatcttggagggatgtgggaa
gagataaggccaaagataaaagctttcatggagaaaagctcggaaatggatctggtccgg
acattattgcagaataagttctattggaagaagcacttgatgggttcggattggactatg
gaggatgttgccctgttcttagcaaagaatccggaggatattcatgctgtgaatggctct
acttatacttggcgggatgctttcaatgaaaccgactatgctgttatgaccatctcccgc
ttcatggaatgtgttaacctcgacaagctggaagctgtgcctagtgaggtgcgcctgatc
aacaagtccatgcaactgctagaccagagaaggttttgggctgccattgtcttccctgaa
attgctcctaggagtgcaaagttgccccagcatgtcaagtacaagatccggatggacata
gacagcgtggaaaggacaaacaaaatcaaggacgagtactgggacccaggtcctcgagcc
gatccttttgatgacatgcgttacatctggggaggctttgcttacttgcaggacgtgatc
gagcaggcaatcatccgcactctgacaggctctgaaaagaaaatgggtgtctatgttcag
cagatgccctatccttgttatgtggatgacatatatttgcgtatcaccagcaaatccatg
ccccttttcatgacactggcttggatctattctgtggcaatcattatcaaagggattgta
tatgagaaagaagcccggttgaaggaaacaatgaggattatgggcctggacaatggcatt
ctctggctgagctggttcattagcagcttcatcccgcttctcatgagtgcaggactcttg
acagtgatcctcaagaaaggaaacttactaccttacagtgaccccagcgttgtgttcggc
tttctatcaatctttggggtggtgaccatcatgcagtgcttcctcatcagcaccctcttc
tcaagggccaacttggcagcggcttgtggggggatcatctactttaccttctacttgcct
tttgtgttatgtgttgcctggcaggactacatcagcttctctctaaaaatatttgcaagc
ctgctttctcctgtggcctttggatatggctgtgagcatctttcccttcttgaagagcaa
ggcattggggtgcagtgggacaacatctttgaaagccccagggaagaagacagctttaac
ctcaccacgtctgtgtctatgatgctggttgatagtttgctgtatgggattatgacctgg
tacattgaagccgtctttccagggcagtttggcattccaagaccgtggtatttcccattt
atgaagtcctactggtgtggcgagaaatccaaagaagggcaaatcccttctctttctgaa
aaatcttctgaaatttgtatggaagaagagccaagccaccttcgccttggggtatcgatt
cagaagctggtgaaggtctaccgtgatggcaagaagctggcaatagatggccttactctg
aatttctatgaagggcagatttcctcctttttgggacacaatggagccgggaaaaccacc
acaatgtccatcttgacaggattatttcccccaacttcgggcacagccttcatcctgggc
aaagacatccgtactgaactgagcactatccggcagaacctgggcgtttgcccccagcac
aatgttttgtttgatgagctgactgtagaagagcacatttggttttatgcacgcctcaaa
gggctgtcagcgaagttggtgaaaaaggaaatggaacagatggccattgatgttggcttg
cctcataaactcaaatcgaagacaagcaaactctctggtggcatgcaaagaaagctttcg
gtcgctctggcctttgtgggtggctctaaagttgtcattttggatgagccaactgctggg
gttgatccatattctcgcagagggatctgggaacttcttttgaagtatcgccaaggccgc
acaatcattctgtctacacaccacatggatgaggcagatatccttggagaccgaattgcc
atcatctcccatggcaaactctgctgtgttggctcctctctgttcctgaaaaaccagctg
ggtacaggctactatttgacattagtcaagaaggatgtggattcctccctgagttcttgc
agaaacagcagcagcactgtctcttacttgaaaaaggatgacagcgtctctcagagtagc
tctgatgctgggcttggcagcgatcatgaaagtgacaccctgacaatagatgtatcagcc
atttctaatctcataatgaagcacgtcccagaagcacggttggtagaggacatcggacat
gagctaacctatgttttgccctatgaagctgctagagagggagcttttgtggagctgttt
catgagattgatgaccgcctctcggacctgagaatttccagctatggcatttctgagact
actctggaggagatatttctgaaagtagcagaagacaacggtgtggatgcagagacctca
gatggcacattacctgctcgaagaagccgtgtctttggagacaggcaaagctgtcttcgt
cctttcacagaagacgatgcttttgacaccaatgattctgatatagatccagaatcccga
gagaccgacctgctgagtgggatggatggcaaaggatccacccaagtgaagggctggaag
ctgacccagcagcagtttgtagccctgctctggaagagacttcttattgccaggcgcagc
agaaaaggctttttcgctcagattgtgctcccagctgtctttgtttgcatcgctctcctg
ttcagtttgattgtgcctccctttggtaaatatccaagtctggaattgcagccatggatg
tatgatgaacaatatacatttatcagcaatgatgctccagatgacactgggactcagaag
cttttggatgctctcctcagcaaacctggttttggaactcgctgcatgaaaggatactct
attgaagatactccttgctctgtgggggaagaggattggaccactgcttccgttcctaag
acagtcatggaaatcttgcagaaagacaattggacaatggagaacccctccccatgttgt
atatgcagcagtgagacgatcaagaagatactacctttgtgtcctgcaggggctggtggc
ctgcctcctccacagagagtacagaacaccactgacatccttcagaacctgactggacgc
aacatttctgattaccttgtgaagacatatgctcagatcattgagaaaagcctgaagaat
aaaataagagtgaatgagttcagatatggtggcttttccttgggagccagcagctccctt
gtgctccctcgacgtgaagaagtaagtgaggccatccagcaggtgaagaaactcttggaa
atcaccaaggacagttcggcagaacgtttccttaacagcctggcaagcttcatgaaaggc
atggacacgaaagataacgtgaaggtatggttcaacaacaaaggctggcatgctgtgggt
gcctttctcaacgtgatgaacaatgccatcctccgtgccaatctgcaagatggagagaat
cccagtgcctatggcatcacggcatacaaccaccctctcaatttgacgaagcaacagctc
tccgaagttgccttgatgacaacctcagtggatgttttggtctccatctgcgtcatcttt
gccatgtccttcgtaccagccagctttgtggttttcttgatccaagagcgagtcagcaag
gccaaacacctgcagttcatcagtggtgtgaaaccagtaatctactggctggctaacttt
gtatgggatatgtgcaactatgttgttccagctaccttggtcatcatcatcttcatctgc
ttccaacagaagtcgtatgtgtcctcatccaacctgccagtgttggctcttctcctctta
ctttatgggtggtccataactcctctcatgtacccagcatcctttgtattcaagatcccc
agtacggcatatgttgttctgaccagcgttaacctcttcattggtatcaatgggagcgtg
gccactttcgtccttgaacttttcaccaataataagctgaacaacatcaatgacattctc
aagtctgtgttcctcattttccctcacttctgtctgggtcgtggcctaattgacatggtg
aaaaatcaagctatggctgatgctctagaaagatttggtgaaaaccgctttgtttcccct
ctctcctgggatcttgtgggacggaatctttttgccatggctgtagaaggtgcggtcttc
ttcctcatcacgttgctcatccagtacaggttctttatcaagcccaggcccatctatgcg
aagcttccgcctgtgagtgaagaggatgaagatgtgaacagagaaaggcagaggatcatt
ggcggtggtgggcaaagcgacatcttagaaatcaaagaactaactaagatatacagaatg
aaacgaaagccagctgtggataggatttgtgtcggaattccacctggggagtgctttggt
cttctgggtgtgaatggtgctggcaaatcctccacctttaagatgttgactggagacaca
gatgttacaggaggagatgcttttctgaagggaaacagtattttatctaacatccaagaa
gtccaccagaatatggggtattgcccacaatttgatgccattaatgagctgctgacggga
agggaacacttggaattctttgcactcttaagaggggtttcagtaaaggaagtctgcaag
gttggtgaatgggctgttcgtaaactaggcctcgtaaagtatgcagagaaatacgcagga
acctacagtggtgggaacaagcgcaagctctccactgcaatggctctcattggagggcct
cctgtggtcttcctggatgagccaacgacagggatggatcccaaggcacgccgtttcctt
tggaattgtgccttgagtgtcatcaagcagggacgatcagtggttcttacatctcacagc
atggaagaatgtgaggctctctgcactcgaatggcaatcatggtcaatggacagttcagg
tgccttggcagtgtccagcacctgaagaacaggtttggagatggctacacaatagtagtg
cgaatagctgggtcaaaccctgacctgaaacctgttcaggacttctttcagcaggccttt
cccggcagcgtgctgaaggaaaagcatcgcaacatgctgcagtatcagctcccatcctct
ttgtcttctctggctagaatatttagcatcctttccaataacaaaaaaagactccacata
gaagactactccgtttcccagaccacacttgaccaagtatttgtaaactttgcaaaggac
caaagtgatgacgaccacacgaaggacttgtcattgcacaaaaaccagactgttgtagat
gttgcaatgctgacgtcttttttgcaagatgagaaagtgaaagaaagctatgtatga
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integrated database retrieval system
