Anolis carolinensis (green anole): 100557498
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Entry
100557498 CDS
T01608
Symbol
dhx15
Name
(RefSeq) DEAH-box helicase 15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100557498 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100557498 (dhx15)
03009 Ribosome biogenesis [BR:
acs03009
]
100557498 (dhx15)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100557498 (dhx15)
Spliceosome [BR:
acs03041
]
Complex A
U2 snRNP components
U2 related factors
100557498 (dhx15)
Complex B
100557498 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100557498 (dhx15)
Ribosome biogenesis [BR:
acs03009
]
Eukaryotic type
90S particles
Helicases
100557498 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Helicase_C
Atrophin-1
Flavi_DEAD
AAA_25
AAA_29
DUF3915
Motif
Other DBs
NCBI-GeneID:
100557498
NCBI-ProteinID:
XP_016849666
Ensembl:
ENSACAG00000000412
LinkDB
All DBs
Position
5:73413791..73471745
Genome browser
AA seq
749 aa
AA seq
DB search
MSKRHRLDLGDDYGSNKKRLASDGKDRERDRDDRSKDRDRDRDRDRERERDKEKDLRPSA
NSALIAGVGVPALKPTVLPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKPNGAIGRKVSGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASA
QQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFD
FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE
ILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYD
NFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLER
TGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYY
DMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccgcctcgacctcggggacgactacggctccaacaagaagcggctc
gcctccgacggaaaggaccgagaacgggatcgcgatgaccgctccaaagatcgtgacagg
gatcgagatagagatcgtgagagggaaagagataaagaaaaggatttacgtccttcagcc
aactctgcactcattgctggggttggcgtgccagctttaaagccaactgtacttccacag
ggtatcaatccatttacaaacctaccacacacacctcgttactatgagatcttaaagaaa
cggcttcagctccctgtctgggaatataaggaaagatttactgatatcctcatcagacac
cagtcttttgtacttgttggtgagacaggctctggtaaaacaacacagatccctcagtgg
tgtgttgattatatgcgttcgctgccaggaccgaagagaggtgttgcatgtactcaaccc
agaagagttgctgcaatgagtgtggcccagagagttgcagatgaaatggatgtcatgtta
ggccaggaagttggttattccattcgatttgaggactgcagtagtgcaaaaactattcta
aagtacatgactgatggtatgttactgcgtgaagctatgaatgatcctttactggaacgt
tatggagtaataattcttgatgaagctcatgaaagaaccctggctactgatattttgatg
ggtgttctaaaagaggttgtaaggcaaagatctgatttaaaggttatagtaatgagtgct
actctggatgctggtaaatttcaaatttattttgataactgtcctttgctcactatacct
ggccgtacacatcctgtggagatattttataccccagaaccagagagagattacctggag
gcagctattcgtacagttatccaaattcatatgtgcgaagaagaagaaggagatctttta
ctttttcttactggacaagaggaaatagatgaagcctgcaagaggataaagcgtgaaatc
gatgatctgggccctgaagttggtgacattaaaatcattccattatattccacgcttcca
ccacagcagcagcagaggatttttgagcctcctcctccaaaaaaaccaaatggtgcaatt
ggacgaaaggtaagtggtgtggtatttgtcattgatcctggatttgctaaacagaaggta
tacaatcctcgaataagggtggaatctctattggtaactgcaataagtaaagcttctgct
cagcagagagctggccgtgctggccgtactaggccaggcaaatgttttagattatataca
gagaaggcttacaaaactgagatgcaggacaatacctaccctgaaatactgagatctaac
ttgggatctgtcgtattacaactgaagaaacttggcatagatgatttggttcactttgat
tttatggacccaccagcaccagaaaccttgatgagagccctagagcttttgaattaccta
gctgctttaaatgatgatggagatttgactgaattgggatccatgatggcagaatttcca
cttgatccacagctggctaaaatggttattgcaagttgcgactacaactgttctaatgag
attctgtctataactgccatgctgtcagtcccacagtgttttgttcgccccacggaagcc
aagaaagcagcagatgaggccaagatgaggtttgcccacatagatggagatcatttgacg
ttgctgaatgtctaccacgctttcaaacagaatcatgaatcggttcagtggtgttatgac
aacttcattaactacaggtccctgatgtctgcagacaatgtacgccagcagctgtcacga
atcatggacagatttaatttgccacgtagaagcacagacttcacaagtcgggactattac
atcaatataaggaaggctttagttactggttacttcatgcaggtagcacatttggaacgg
acaggacattatctaacagtgaaagacaaccaggtagtccagctacatccttctacagtt
cttgaccacaagcctgaatgggtgctttacaatgaatttgttcttaccacaaagaactac
atccgcacttgtacagacatcaaaccagaatggttggtgaaaattgcccctcaatattat
gacatgagcaatttcccacagtgtgaagcaaagagacagttggatcgcatcattgccaaa
cttcagtccaaggaatattcgcagtactga
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