Entry |
|
Symbol |
pdzrn4
|
Name |
(RefSeq) PDZ domain containing ring finger 4
|
KO |
|
Organism |
acs Anolis carolinensis (green anole)
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Brite |
KEGG Orthology (KO) [BR:acs00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:acs04121]
100557622 (pdzrn4)
Enzymes [BR:acs01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100557622 (pdzrn4)
Ubiquitin system [BR:acs04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100557622 (pdzrn4)
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
5:complement(55663523..55950235)
|
AA seq |
858 aa
MSQPRRVGKWAVSTRLKFGRLRESCSCSRASFDTNLIPLIEEESKLLTIMLHRENNALGF
NIVGGQLIQDNQMESAEGIYVSRILENGPADKKDGMRINDKIIEVNGKDLSKATHEEAVE
AFRNAKEPIVVQVLRRAPLIKTYGSIQDVRLIDVSTQTDITFEHIMALAKLRPTTPPVPD
ICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPGDADRTEDFEYEEVELCRISSQEKLGLTV
CYRTDDEEDTGIYISEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSDECKK
IVLLVARPELQLEEGWLDDERSEFLEELNLEMLEEQHNEAQQYTGNEVEQPKKHEEEDGT
TDTATSSSNNNEKDSGVGPTDESQRNDESSEQENPPEEQNNTTLQSPQEVVQSQDTMGSI
ELQCKQSLVSGEYIQSDFVDNQEEDCERFRQLLELKCKIRKHGEYDLYYSSSTIECNRRK
KNGVEHELQLLNEELRNIELECQNIMQAHRLQKVKDQYGDIWALHGGTFTNYSTTIDLQG
EKLDDIIEHPEKSDKDSSSAYNTAESCRSTPLNVERSPDSSLQRMISITNRKNLRSTIVA
NQLSSRQSTTETTPNKAKATEQSSSVEKKETVSESSKSTERDKQSPEHIPYLSPYHSSPY
RYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVNMCKDSQKGTEPKMEWKVKIRSDGT
RYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRR
RREFMMRSRLDCLKESPQSSSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGA
KSPDDTRVHNAFLSVTTV |
NT seq |
2577 nt +upstreamnt +downstreamnt
atgtcccaaccacgccgggtggggaagtgggcggtgtcaaccaggctcaagtttgggcgt
ctgagagaaagctgtagttgcagcagagcttcgtttgatactaatttgataccactaatt
gaagaagaatccaagctcttaaccatcatgcttcacagagaaaacaatgctttgggattt
aatattgttggaggacaacttatccaggataatcagatggaatcagcagaaggaatttat
gtatccagaatcctggaaaatgggcctgcagacaagaaagatggtatgcgaattaatgac
aagatcatagaggtcaatggaaaagatctgtccaaagccactcatgaagaggcagtggaa
gcatttcgtaatgcaaaagagcccatagtagttcaagttctgcggagagcacctcttatt
aaaacatatgggagcatacaagatgtgcggctcatagatgttagcacacagacagatatt
acatttgagcacattatggcactggccaaacttaggccaaccacacctccagtacctgat
atctgccccttcttgctttctgacagctgccactctcttcacccggttgaacatgaattt
tatgaaggtaatgagtatctttcaagtctacctggtgatgcagatagaactgaggacttt
gagtatgaggaagttgagctttgtcgcattagcagtcaggaaaagttgggattgacagtc
tgttaccgtaccgatgatgaggaagacacaggaatctatatcagtgaggttgatccaaac
agtattgctgcccgagatggacggattcgggaaggagaccggattttacaaataaatggc
caagatgtccagaaccgggaggaggcagtggcactgctctctagcgacgaatgcaagaag
attgtattgttggtggcaagaccagagttgcagctggaagaaggatggctggatgatgaa
aggagtgaattcttagaggagttaaacttggaaatgttggaagaacagcataatgaagca
cagcagtacacaggcaatgaagtggagcagccaaagaaacatgaagaggaagatggcacc
acagatactgctacctcatcatccaataacaacgagaaagacagtggagtgggtcccaca
gatgagagtcaacgtaatgatgagagctcagagcaagagaacccaccagaagagcagaac
aacacaaccttgcagagtccacaagaagttgtacaaagccaggacactatgggaagcatt
gaactccagtgcaaacaaagtctagtgtctggggaatacattcagtctgactttgttgat
aatcaggaagaggactgtgaaaggtttcgccagctgctggagctcaagtgtaagatccga
aaacatggtgaatatgatttgtattattccagtagcacaatagaatgtaacaggagaaag
aagaatggtgttgaacatgaacttcagctgctcaacgaggaactgaggaacattgaactt
gaatgtcagaacattatgcaggctcaccgactccaaaaggtaaaagatcagtatggagac
atttgggcactacatggtggtacattcacaaattatagcaccacaatagaccttcaaggg
gaaaaactagatgacataatagagcacccagagaaatcagacaaagacagctccagtgct
tacaatacagcagaaagctgtagaagcactccactgaatgtagaacgatctcctgacagc
tctctccagcgcatgattagcatcaccaacaggaaaaacctcaggagcaccattgtggct
aatcagctgtcttcgaggcagagtaccacggagacaacccccaacaaagccaaagctact
gaacaaagcagttctgttgaaaaaaaagaaactgtttcagaaagtagtaaatcaacagag
cgagacaaacaaagccctgagcatattccttatctgtctccctatcatagttctccatac
aggtatgggaacatacctgcacatgctaagcattatcaaagctatatgcagctgatacaa
caaaaatctgctgtggagtatgcccagagtcaactcagcctagtgaacatgtgcaaagat
tcacaaaagggtacagagcccaagatggaatggaaagttaaaataaggagtgacggaaca
aggtatatcacaaaaagacctgtaagagacagaatcctgaaggaacgtgccttaaagatt
aaagaggagcgcagcgggatgacaacggatgatgatacgatgagtgaaatgaagatgggt
cgttattggagcaaagaggagcggaagcagcacctggtgcgagccaaggagcagagaagg
cgccgggaattcatgatgcgtagccggttagattgtcttaaggagagtccccaaagcagc
agcgagggcaaaaaagaaattaacatcattgaactcagtcacaaaaagatgatgaaaaag
aggaacaagaagatcttggacaactggatgactatccaggaactcatgacacatggtgct
aaatccccagatgacacaagagtgcacaatgcttttttatcagttactaccgtatga |