KEGG   Anolis carolinensis (green anole): 100557850
Entry
100557850         CDS       T01608                                 
Symbol
utp4, cirh1a
Name
(RefSeq) UTP4, small subunit processome component
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:acs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100557850 (utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acs03009]
    100557850 (utp4)
Ribosome biogenesis [BR:acs03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100557850 (utp4)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR5 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_HPS5 Beta-prop_VPS8 WD40_Gbeta Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 100557850
NCBI-ProteinID: XP_008121670
Ensembl: ENSACAG00000003151
LinkDB
Position
Unknown
AA seq 693 aa
MGEFEVHRARLFSFVPSGVRCLAFAGPPLLPSGPRLALARLDGTLELCHLQANAFRDKVI
PGHGTQVPEALCWVAGGRLFGAGLSGDIFEYDLQKLCIKYSLDAFGGALWSMEAHPNGTQ
LAVGCDDGSIKLFVVLPDRIQFERQLDRQKGQILSLSWHPSGTKIAAGSLDIIHVFDVES
GHCTQQIHVERRLQAPQGQSCVVWGLAFLSDGTVVSADSAGKVQFWDSEMGTLLSKHPVS
KAAALCVAVSEAGDSLVVGTSEGTVLQFQLLPVRLGHTELQWVRTRQFHHHTHDVRTVAH
SATAFFSGGLDGQLVIRPLMEKVEFKSYEAALRKITFPHRCLVSFARKPRLLLFQYPQHL
ELWRLGATDATGKAGDVLPVSRPPEHLLQLKAKGPEHIGSSCLSPCGGWIAYSSASRFCL
HRVRIENGQVVLQRVPNVPKLLCSAHCLLFSADSTRLFVGSDRGCVHVLKLLKSKNSCKH
LHTLRPNTETAEAVYLLATSADGKWLAAASGDREINAYSLEEAKLHCTVPAYDCPASALA
IHPLTNNLVIAHSDQQLFEFSLASREYTPWSRKVQQSGLHRDWLERDTPITHLAFSPRQD
GLLLLHDTYMFCIIDKALPLPSEASVLGNQLSLSQLPRAAQRSASHAFKVCKKYQPLLFV
DFLGDDSLVVVERSITDLKAQLPPPVYQKKFGT
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgggcgagttcgaggtgcaccgggcccggctcttcagcttcgtaccctccggggtgcgc
tgcctggcctttgcggggcctccgctgcttccttcggggcctcgcctggccctggcccgc
ctcgacggcaccctcgagctctgccacctccaggccaacgccttccgggacaaggtgatt
cctggccacggaacgcaggtcccggaggcgctgtgctgggtggcggggggacgtcttttt
ggcgcaggcctcagcggagacatctttgagtacgacctgcagaagctgtgcatcaaatat
tctctggacgcttttgggggggccctttggagcatggaggcacaccccaatgggacccag
ctggcggtgggctgtgatgacggctccatcaagctctttgttgtcttgccagacagaatc
cagtttgagcggcagttagaccgacagaaaggccaaatcctgtccctctcctggcatcct
tctggcaccaagattgcagcaggttcccttgacattatccatgtctttgacgttgaatca
ggccactgcacccagcagatccatgtggagcggcgactacaagcgccccagggccagagt
tgtgtggtctggggcctggccttcctctcggacggcactgtggtcagcgccgactccgct
gggaaggtccagttctgggactcggagatggggacgctgctttccaagcacccggtcagc
aaggcagccgccctctgcgtggcggtctctgaggcaggggacagcctggtggtgggcacc
tcggagggcaccgtcctccagttccagctgctcccggtccgccttggccacactgagctc
cagtgggtccgcactcggcagttccatcaccacacgcatgatgtccggaccgtggcccac
agcgcaaccgccttcttctccggtgggttggacgggcaactggtgatccggccactgatg
gagaaagtggagttcaagagctacgaggccgccctccggaagatcaccttcccacatagg
tgcctggtgtcctttgcccggaagcctcgcctcctcctcttccagtacccacaacacctg
gagctgtggcgcctcggggccaccgatgccacaggaaaagccggggatgtccttcctgtg
tctcgccctccggagcacctcttgcagctcaaggccaagggtccggagcacatcggcagc
agctgcctctctccctgcggcgggtggatcgcctattcttctgcctccaggttctgcctc
caccgcgtccggatcgagaacggccaggtggtcctccagagggtccccaatgtcccgaag
ctgctttgttctgctcactgtctgctcttctctgcggactccacccgactctttgtgggg
tcggaccggggctgtgtccacgtcctgaagctcctgaagtccaagaattcctgcaaacac
ctgcacaccctccgccccaatacagaaacggcagaagctgtgtacttgctggccacaagt
gccgatggcaagtggttggctgcggccagcggagaccgggagatcaacgcctacagcttg
gaagaggccaagctgcattgcactgttcctgcctacgactgtccggcctccgctttggcc
attcacccgctgaccaacaacctggtcatcgcccattcagaccagcagctgtttgagttc
agcctggccagccgagagtacactccctggagccggaaggtgcagcagtcagggctccac
agggactggctggagcgggacacccccatcacccacctggccttcagcccccggcaggac
ggcctcctcctcctccacgacacttacatgttctgcatcatagacaaggccctgccattg
cccagcgaggcgtccgtcttgggcaaccagctctccctctcgcagctccctcgggccgcc
cagcgctctgccagccatgccttcaaagtctgcaagaagtaccagcctctgctctttgtg
gacttcttgggcgacgattccttggtggtggtggagcgctccatcaccgacctcaaggcc
cagctgccgcccccggtttatcaaaagaagttcggcacctaa

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