Anolis carolinensis (green anole): 100558208
Help
Entry
100558208 CDS
T01608
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100558208 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acs04515
]
100558208 (vcam1)
04090 CD molecules [BR:
acs04090
]
100558208 (vcam1)
04091 Lectins [BR:
acs04091
]
100558208 (vcam1)
Cell adhesion molecules [BR:
acs04515
]
Immunoglobulin superfamily
VCAM
100558208 (vcam1)
CD molecules [BR:
acs04090
]
Proteins
100558208 (vcam1)
Lectins [BR:
acs04091
]
I-type lectins (Siglecs)
100558208 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set
V-set
C2-set_2
ICAM_N
Ig_5
Motif
Other DBs
NCBI-GeneID:
100558208
NCBI-ProteinID:
XP_008107356
LinkDB
All DBs
Position
4:87671908..87686367
Genome browser
AA seq
577 aa
AA seq
DB search
MSFLAPAALFFLLASQMAMTFEILDIASGHNIAAQIGARLVLNCCTTGCESPEFSWRTQL
DNPLGGIVSRQGSNSSLTLASVGFEHEQNYVCNAICGSERKERRVQIDIYSFPSDPIIEI
NGPLVLGKPSTISCHVPKVYPSECLLLSFKREGKVLKEEEFFHEEPTKSLETKTVTVIFT
PTEEDIGKEITCIAELPIEEMEFEPKQRQAKHLLDVNFGPRNTHLTASPGKTLLEGEALT
LSCKTESHPPAKVVWKKQLANDTVQQIAESDYFSIPNVQFSDSGIYICEATNDVTNEVEK
RMVSLSVQGAPRHLEFSFLPGSTVQEGESVTLQCSAESDPAATVVIRRKFPRETEVQGGF
VHIPRVSLDDAGDYECQAENQFGTINRTTSLIVESFSPTTPTVTDGPEITTEVEDFTIKT
TASDAPQQEADHLENSTPPAPQVFSPTTPTVTDGPKITTEVEDFTLKTTASDAPQQEADH
LEDTTPLAPQGTLSQLYTTSKNNTTTYVVDNDISNGTEVIGIFLDEIKEPDYVIPVIVVV
SVLATAAGPMTALMIYIFRKAKINGSYSLVKSLKPEV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcctcgctccagccgcacttttcttcctcctggcctcccagatggcaatgacg
tttgagatcctggacattgcatcaggtcataacattgctgcccagattggagcccgcctg
gtgctaaattgctgcacgactggatgcgaatcccccgaattctcttggagaacccagttg
gacaacccattgggagggatcgtgagccgccaaggaagcaactcctccttaaccttggca
tcagttgggtttgaacacgagcaaaattatgtctgtaatgctatttgtggcagtgagaga
aaagaaagaagagtccagattgacatctactccttccccagtgatcctattatcgagatc
aacggcccacttgttcttgggaaaccatctactatcagctgccacgttcctaaagtgtat
ccgtctgaatgcctgctgctgtctttcaagagagagggaaaagttcttaaggaagaagag
ttctttcatgaagaacccaccaaatcactagaaactaaaacggtgaccgttatctttact
ccaactgaggaagatattggaaaagagatcacatgcatagctgaattgccaatagaggag
atggagttcgagcccaagcagaggcaggcaaaacatctcctcgatgtcaactttggtcca
cggaatacacaccttactgcatctccagggaagacccttttggaaggagaagcattgacg
cttagttgcaagactgaaagccacccaccagccaaggttgtctggaagaagcagctggcc
aatgacactgtccaacaaattgcagaaagtgattatttctccattccaaatgttcaattc
tcagattcaggaatttacatctgcgaagccacaaatgatgtaaccaatgaagtggagaag
agaatggtgtccttatctgtacaaggtgcccctagacacctagagttctcctttcttcct
ggctcaacagtgcaagaaggggaaagtgtgactctccagtgttctgcagagagtgaccct
gctgccacagtggtgataaggagaaaatttccccgtgagactgaagtccagggtggattt
gtccatatcccaagagtgagccttgatgacgcaggagactatgagtgtcaagcagagaat
caatttgggacaattaacaggacaacatcactcattgtagaatccttttcaccaacaact
ccaacagtaactgatggacccgaaataactactgaggtggaagattttactattaagact
acagcttctgatgctccacagcaagaggctgatcatctggaaaatagtactccacctgcc
ccacaagtcttttcaccaacaactccaacagtaactgatggacccaaaataactactgag
gtggaagatttcactcttaaaactacagcttctgatgctccacagcaagaggctgatcat
ctggaagatacaactccacttgccccccaaggaacactctctcaattatatacaacatcc
aaaaacaatacaactacatatgtggtggataatgatattagcaatggcacggaagtgatt
ggaatattcctggatgaaataaaagagccggattatgtgattcctgtgatcgttgtggtt
tccgtcttggcaacggcagccggccccatgacagcactgatgatttacatctttaggaag
gcaaagatcaatgggtcctacagtcttgtgaagtcgctgaagccagaagtgtga
DBGET
integrated database retrieval system
