Anolis carolinensis (green anole): 100558775
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Entry
100558775 CDS
T01608
Symbol
exosc1
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100558775 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100558775 (exosc1)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100558775 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100558775 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
100558775
NCBI-ProteinID:
XP_003229155
UniProt:
H9G5X2
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MHAACSPMELRFPSCPARRLILFLRHFFLSRTSQASAGANQSRDHEIGQWEVRRPGWREC
VSLMAPARCCVPGERLCSLEEGVPGSGTYTRHGFIFASLAGCLVRKSENGTLPVISVMRD
VESQLLPDVGATVTCKVCSINSRFAKVHILYVGSSPLKTPFRGTIRREDIRATEKDKVEV
YKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTH
GKELRKVARVQPQFLQT
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccgcatgttccccaatggaactacgattcccgtcgtgtcccgcgcggcgccta
atactcttcctccgacattttttcctctcccggacgtctcaagccagcgccggggcaaac
caatcacgtgaccacgagattggccaatgggaggttcggaggcctggttggagagagtgt
gtttccctcatggctcccgcgcggtgctgcgtccctggagaacgactgtgtagtttagaa
gaaggagttcctgggagtggcacctacacgcgtcatggttttatctttgcctctttggct
ggttgtcttgtgaggaaaagtgaaaatggcacgctccctgttatctctgtgatgagggat
gtggagtctcagcttctgcctgatgtgggagccacagtgacatgcaaggtttgcagtatt
aactctcgttttgcaaaggtgcacatcttgtatgttggttcttcaccactgaaaacccca
ttccgtggaacaatcaggagggaggatattcgagctacagagaaagacaaggtagaggtt
tacaaaagttttcgccctggagatatcgttttggccaaagttatctctttaggtgatgca
caatccaactacttattaaccacagcagaaaatgaactgggggttgtggtggctcatagt
gaagcaggtgtacagatggttccaatcagctggtgtgaaatgcagtgccccagtacacat
ggcaaggagctgcgcaaggtagcacgggtacagccccagtttctgcaaacatag
DBGET
integrated database retrieval system
