Anolis carolinensis (green anole): 100559065
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Entry
100559065 CDS
T01608
Symbol
rbm39
Name
(RefSeq) RNA binding motif protein 39
KO
K13091
RNA-binding protein 23/39
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100559065 (rbm39)
Spliceosome [BR:
acs03041
]
Common components
Common spliceosomal components
General mRNP proteins
100559065 (rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
100559065
NCBI-ProteinID:
XP_008108161
Ensembl:
ENSACAG00000006436
UniProt:
G1KFG3
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All DBs
Position
4:complement(134447202..134478287)
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AA seq
523 aa
AA seq
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MADDIDIEAMLEAPYRKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAIRGKIGLPHNIKI
SGRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKV
RDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMA
NNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFS
DSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQL
MARLAEGTGLQIPPAAQQALQMSGSLAFSAVADLQTRLSQQSEVLAAAASVQPLATQCFQ
LSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVVHIYVDKNSAQGNVYVKCPSIAAAIAA
VNALHGRWFAGKMITAAYVPLPTYHNLFPDSMNATQLLVPARR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatatagaagcaatgcttgaagctccttataggaaggatgagaac
aaattgagcagtgccaatggccatgaagagcgcagcaagaagagaaaaaagagcaagagt
agaagtcgtagtcatgacagaaaaaggagtaaaagtaaggaacgcaaacgaagtcgtgat
cgtgaaaggaagaagagcaaaagtcgagagaggaaacgcagtagaagtaaagagcggaga
cgtagccgttcaagaagccgggaacggcgattcagaggacgttaccgaagtccttattcg
ggtcccaagttcaatagtgccatcagaggaaagattggcttgcctcataacatcaaaata
agtggtagacggcgatctaggagcaaaagtccattcagaaaagacaagagtcctgtaaga
gaaccaattgataatcttactccagaagagagggatgctcgaacagtattctgtatgcaa
cttgctgcaagaattaggccaagagaccttgaggaatttttctctacagtaggaaaggtc
cgtgatgtacgcatgatttcagatagaaactcgagacgttccaagggaattgcttatgtg
gaattcgttgatgttagttcagtacctttggcaattggattaactgggcagcgagtgttg
ggagtaccaattattgtacaagcatctcaagcagagaaaaatagagcagctgcaatggct
aataatctacaaaagggcagtgcaggccccatgaggctctatgtaggatccttacacttc
aacataactgaagatatgctccgtggaatttttgagccatttggccggattgaaagcatc
cagctgatgatggacagtgaaactgggcgttccaaaggatacggatttatcactttttca
gattcagagtgtgctaaaaaggctttggaacaactaaatggatttgaattggctgggaga
ccaatgaaagtaggtcatgtaacagaacgcacggatgcatccagtgctagttcatttttg
gacagtgatgaactggaaaggactggaattgatttgggaacaactggccgtcttcagttg
atggcgagactggctgaaggtactggtcttcagattcctccagctgcacaacaagctttg
cagatgagtggctcattagcatttagtgctgtagcagatttgcagactcgactttcacag
caaagtgaagtattggctgcagctgcttcagtacaacctcttgcaacacaatgtttccag
ctttccaacatgtttaaccctcaaactgaagaggaagcaggctgggatacagaaattaag
gacgatgtgattgaggaatgtaacaaacatggaggagttgtccacatttatgtagacaaa
aattcagctcagggcaacgtctatgtaaaatgcccttcaatagcagcagcaattgcagct
gtaaatgcattacatggaaggtggtttgcaggtaaaatgataacagcagcatatgtacct
ctgccaacgtaccacaacctttttccagattctatgaacgcaacccagctcttggttcct
gctcgacgatga
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