Anolis carolinensis (green anole): 100559157
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Entry
100559157 CDS
T01608
Symbol
sf3b1
Name
(RefSeq) splicing factor 3b subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100559157 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100559157 (sf3b1)
03036 Chromosome and associated proteins [BR:
acs03036
]
100559157 (sf3b1)
Spliceosome [BR:
acs03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100559157 (sf3b1)
Complex B
100559157 (sf3b1)
Complex C
U2 SnRNP specific factors
100559157 (sf3b1)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100559157 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
100559157
NCBI-ProteinID:
XP_003227044
Ensembl:
ENSACAG00000009612
UniProt:
H9GFG8
LinkDB
All DBs
Position
Un
Genome browser
AA seq
1302 aa
AA seq
DB search
MAKIAKTQEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKN
RRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGASSQPPSKRKRRWDQTADQTPGTTPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERD
TPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGSSTPVLTPGKTPIGT
PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAVFPEGYRVLPPPAGYV
PIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDLQYFDKLLVDV
DESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARH
TGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIE
SFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDE
EMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELAN
KVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQE
QTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVM
KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTP
ILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFG
YIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELN
VQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGF
GCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVR
DVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYVL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacgcaggaagatattgaagcacagattcgagaaatccaaggg
aaaaaagctgcccttgatgaagctcaaggagtgggccttgattctactggatactatgat
caagagatctatggtggaagtgacagcaggtttgctggatacgtaacttcaattgcagca
actgaactagaagatgatgatgatgactactcctccacaagcttacttggccagaagaaa
cctgggtaccatgcgccagtggcactgcttaatgacataccacagtcaactgaacagtat
gatccatttgctgaacatcgtccccaaaagatcgctgatagagaagatgaatacaaaaat
cgcagacggatgatgattatttcccccgagcgtcttgatccttttgcagatggagggaag
acacctgatcctaaaatgaatgccagaacatatatggatgttatgcgtgaacaacatcta
actaaggaagagagggaaattaggcagcagcttgcagaaaaggctaaagctggggaactt
aaagtcgtcaatggtgcttcatcccaaccaccatcaaaacgcaaacggcgttgggatcaa
actgccgaccagactcctggtaccacaccaaagaaattatctagttgggatcaagctgag
actcctgggcacaccccatccctgcggtgggatgaaacccctggccgtgcaaaggggagt
gaaacccctggtgccacccctggatctaaaatatgggaccccactcccagtcatacacca
gcaggagctgccacacccggacgtggtgacacccctggtcacgcaacaccaggccatggt
ggtgcaacttccagcgcacggaagaaccgatgggatgagactcctaaaacagaaagggat
actcctggccatgggagcggatgggctgaaactcctcgaactgatcgtggaggcgactcc
atcggtgaaacaccaacccctggagcaagtaaaagaaaatcacgttgggatgaaacacct
gccagccaaatgggtagcagcactcctgtcttaacacctggcaaaacacccattggcaca
cctgccatgaacatggcaacccctaccccaggtcatataatgagcatgactcctgaacag
ctccaagcctggcgatgggagagagagatagatgagagaaacaggcccctttcagatgaa
gagttggatgctgtgtttccggagggttatagggttctccctcctccagcgggttatgtt
cctattcgtactccggctcgtaaacttacagcgactcccacacctctgggcggcatgact
ggattccatatgcagactgaagataggaccatgaagagtgtcaacgaccagccctcagga
aatcttccttttctaaagccagatgacctacaatattttgataaactactggttgatgtt
gacgaatcaactcttagtccagaggaacagaaagagagaaaaataatgaaattacttttg
aagatcaagaacggtacccctccaatgaggaaggccgctttacgacagattactgataaa
gcgcgtgaatttggagccggtccactgttcaatcagattttgcccctgctgatgtctcca
actcttgaagatcaagaacgccatttgcttgtcaaagttattgataggattttatataaa
ctggatgacttggtccgaccatatgtgcataagatccttgtggtcattgaaccattgctg
attgatgaagactactatgccagagtagaaggaagagaaattatttccaacttggctaag
gcagctggtctggccaccatgatctccaccatgagaccggatattgataacatggatgag
tacgtccgtaacacaacagcccgagcctttgctgttgttgcctctgctttgggcatccct
tcccttttgccctttttgaaagctgtgtgtaaaagcaagaagtcttggcaggccaggcac
actggtatcaagattgtgcagcagattgctatcctgatgggttgcgccattttacctcat
ctgagaagtttggtagaaattatcgagcatggtttggtggatgagcagcaaaaagtgcgc
accatcagtgctttggctattgctgctttagcggaggcagccactccctatggcatagag
tccttcgattctgtcctcaaacccctgtggaagggtatccgtcagcacaggggaaagggc
ctggctgccttcttgaaagctattgggtatcttattccacttatggatgctgagtatgcc
aactactataccagagaagtgatgctgattcttatcagagagttccagtctcctgatgaa
gaaatgaaaaagattgtgttaaaggtagtcaagcagtgctgtggcacagatggtgtggaa
gcaaactacattaagacagaaattttgcccccatttttcaagcacttctggcaacacaga
atggcattggacagaagaaattacagacagttggttgatacaactgtggagcttgcaaac
aaagttggagcagcagagattatttcaaggattgtggatgatttgaaagatgaggctgag
cagtaccgaaaaatggttatggagaccatagagaagatcatggggaacttgggtgcagca
gatattgaccacaaactggaggaacagcttattgatggcatcttgtatgccttccaggaa
cagactacagaggattcggtgatgttgaatggttttggcacagtggtcaatgctctgggt
aagcgagtaaaaccctacttgccccagatctgtggtaccgttttgtggcgtttgaacaac
aaatcggccaaagtaagacagcaagcggctgacctgatatctcgtactgcagttgtcatg
aagacctgtcaagaggaaaaattgatgggacacttgggtgtcgtgctctatgagtatctg
ggtgaagaataccccgaagtgctgggcagtattttaggagcactcaaagccattgtgaat
gtcataggtatgcacaaaatgactcctccaattaaagacctgctgccaagactcacacct
attttgaagaacaggcacgaaaaggtgcaggaaaattgcattgacctggttggacgtatt
gcagacaggggggcagagtatgtttctgcaagggaatggatgaggatttgctttgaactg
ctagagttgttaaaagcacataagaaagctattcgaagagctacggtgaatacgtttggt
tatattgcaaaagctattggaccccatgatgtgctggcaacacttctaaataatttgaaa
gtacaagaaagacagaacagagtgtgtaccacggtagcgatagccattgtagctgaaacc
tgctctcctttcaccgtcctccctgcactcatgaatgaatacagagttccagagctgaac
gtccagaatggtgtattgaaatctctttccttcctctttgaatatattggagaaatggga
aaagactacatctatgctgtaaccccattgctcgaagatgctttaatggacagggacctt
gttcacagacagacggcgagtgccgtggtccagcatatgtcccttggggtatatggtttt
ggctgtgaagactcgttgaatcacttgttaaactacgtgtggccgaatgtgtttgagacc
tcgcctcacgtcatccaagctgtcatgggcgccctggaaggcctgcgggtggccattggg
ccctgccgaatgttgcagtattgtttacagggtttgtttcaccctgccagaaaagtcaga
gatgtgtattggaagatctataattccatctacattggttcacaggatgctttaatagca
cattatccacggatctacaatgacgaaaagaacacctacattcgttatgaacttgattat
gtcttgtaa
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