Anolis carolinensis (green anole): 100559658
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Entry
100559658 CDS
T01608
Symbol
ddx20
Name
(RefSeq) DEAD-box helicase 20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100559658 (ddx20)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100559658 (ddx20)
Spliceosome [BR:
acs03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100559658 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FAM199X
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
100559658
NCBI-ProteinID:
XP_008108041
Ensembl:
ENSACAG00000006235
LinkDB
All DBs
Position
4:126743477..126755180
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AA seq
790 aa
AA seq
DB search
MVSSHSLAFAAQDDDQEGRTCFHSRPDISRGLHQHLSKMAAVETPHTESWLRTRDVVLQE
GPEDFSSLLLSPPVLEGLKAAGFLRPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTV
ALDSLILESPVTQILVLAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLNQDKTRLK
KCHIAVGTPGRIKQLIELDFLNTSSIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQM
LAVSATYPESLANTLTRYMRDPTFVRLNSTDPSLIGLKQYFKVVNSHPLPHKTFEEKAEH
LLELFSKIPFNQALVFSNLHSRAQHLADLLTSKGFPAECISGSMNQNQRLDAMAKLKQFH
CRILISTDLTSRGIDAEKVNLVINLDVPLDWETYMHRIGRAGRFGTLGLSVTYCCRGEEE
NMMMKIAQKCNLHLLPLPEPVSPELMEHFESWGVEVTAVPYPNASLCASVLPTESLEGTM
QHKTERSRAQASHVACKNVPAAEPKQIFKKKLLKSRVEHNEAALTENQRASHRVSQQKLQ
VEPDLHMGGHCKEEADKKILQDMLPKIPCLSSYKKCLFTNAWSMAGFVDDYEYFIKEGLE
REVEIIRSFTGPGEQHKHPESDSFDSTGIESGINTATTTGVWTEESGSDSSSYSSGSSAY
CPEDHSYVKHPSSALHSDNMLSTHQTVQRQIQEASLPECIQEASLTQKKMKESKQKRQDC
CAPITKPFKKNKCSENLSAEEYWRSYYRAWRDYYKEASRSYYQMYQRPPNMVTAYHANAI
YFEELLGCYQ
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttctcattcgcttgcgttcgctgcgcaagacgatgatcaggaggggagaacc
tgctttcattctcgtccggacatctcgcgaggtttacatcagcatttgtccaagatggcg
gctgtcgaaacacctcacactgagagctggcttcggacccgggacgttgtcttgcaagaa
gggcccgaagacttcagctcgctgctgctttcccctcccgtgctggaaggtctgaaggct
gccgggtttctgaggccttctcccgtgcagctgaaagccatccctctcgggagatgtggt
ttagatctcattgtacaagcaaagtctggtactggtaaaacctgcgtcttctctactgtt
gcacttgattctctaatcctggaaagtccagttacacagattctagtcttggctcccact
cgagaaattgctgtacaaatacatgcagttattacaactattgggatcaaaatggaaggc
ttggaatgtcatgtttttattggaggcacacctttaaatcaagacaaaacaaggttgaaa
aagtgtcatattgcagttggtacccctggacgtataaagcaactcatagagctggacttc
ttgaatacatccagcatccgtctcttcattcttgatgaagctgataagcttctagaagaa
ggcagtttccaggagcaaatcaattggatttattcttctctgccagccaataagcaaatg
ttagccgtttcagccacctacccagaatcactggctaatactttgactagatacatgaga
gatcccacttttgtgagattaaattccactgatccaagtctcattggattgaagcagtac
ttcaaagttgtgaattctcacccattgcctcacaagacttttgaggagaaggctgaacat
ttactggagctgttcagcaagattcctttcaaccaggccctggttttctcgaatctgcat
agccgagcccagcacctggcagatttactgacatccaaaggttttcctgctgaatgtatt
tcaggcagtatgaatcagaaccagcgacttgatgccatggctaaactcaagcagttccat
tgcaggatcttgatttcaactgatttgacatcacgtggcattgatgctgagaaggtgaat
ctagtaatcaacttagatgttcctttggactgggaaacatacatgcatagaattggaaga
gcaggacgctttggaaccttaggattatcagtgacatattgctgccgtggagaagaagaa
aacatgatgatgaaaattgcacaaaaatgtaaccttcaccttcttcctttaccagaacct
gtttcccctgaactgatggaacactttgaaagttggggtgtagaagtcactgctgtccct
tatcccaatgcttcactgtgtgcatctgtgttaccaacagaaagcctggaagggacaatg
caacataaaacagaaaggtctagagcacaggcttctcacgttgcttgtaaaaatgttcct
gctgcagaaccaaagcagattttcaagaaaaagctacttaaaagcagagtggagcacaat
gaagcagcactaactgagaatcagcgggcttctcatagggtctcgcagcagaaacttcag
gtggaacctgatctccatatgggtggacactgtaaggaggaggcagacaagaaaatctta
caagacatgctccctaagatcccttgcttgtcctcttataagaaatgtctgtttaccaat
gcatggagcatggctgggtttgttgatgactatgagtacttcattaaggaagggttagaa
agagaggtggagatcataagaagtttcacaggacctggagagcagcataaacacccagaa
agtgatagctttgattctacaggaatagaatctggcataaatactgcaacaacgaccggg
gtgtggactgaagaatctggtagtgatagtagctcttatagttctggatcatctgcatat
tgcccagaggaccactcctatgtcaaacacccttcatctgcactgcatagtgacaacatg
ctctcaacacatcagactgtgcagaggcagattcaggaagccagtctccctgagtgcatc
caagaggcatctcttacccagaagaagatgaaagaaagcaaacagaagaggcaagactgc
tgtgctcccatcacaaagcctttcaagaaaaacaaatgttcagagaacctgagtgctgag
gaatactggagatcgtattatcgggcatggcgggactattataaagaagcttctcgttca
tattatcagatgtaccaaagaccacccaacatggtgactgcctatcatgccaatgcaatc
tattttgaagagttgttggggtgttatcaatag
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integrated database retrieval system
