Anolis carolinensis (green anole): 100560102
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Entry
100560102 CDS
T01608
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100560102 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acs04040
]
100560102 (trpv1)
Ion channels [BR:
acs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100560102 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
100560102
NCBI-ProteinID:
XP_003230583
Ensembl:
ENSACAG00000013919
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Position
Un
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AA seq
839 aa
AA seq
DB search
MSGILGKMRKLGSSELEESDGGAEEAATDGEDSASGTPNSTLRAAKHSGGLFARRARFGI
GDGDMAPMDSFFQVDQLVSSPVLKFSLSLERGKCGNHCSKLLSSASIGVRAEKAFKIYSR
RRLFDAVAQGDPSDLDDLFLYLMETMKNLTDDEFKEPDTGKTCLLKAMLNLHNGWNDTIP
LLLDIAKKTDNLKEFVNAEYTDGYYKGQTALHIAIERRNYYLVELLLKNGADVHARAHGE
FFQNIKGRPGFYFGELPLSLAACTNQLNIAKYLLENPFQPADIAAQDSMGNTVLHALVEI
ADNTEDNTKFVTNVYNEILVLGARINPTLKLEEIPNRRGLTPLTLAAKAGKIQVFAYILR
REMKAPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSETPNRHEMLLV
EPLNQLLQDKWDRFVKHLFYFNFFTYTAHILILTVAAYFRPTKKDGVPPFPLRHTTSEYF
RVAGEILSILGGVYFFFRGLKYFKHRRPSLKAVFTDSYSELLFFLHSVLILTSAVLYFSR
QEAYVIFMVFALALGWINLLYYTRGFQQMGVYSVMLEKMMLSDLLRFIVVFLLFHVGFST
AVVTLIEEDDEKPEGLNHTCALCVWQAKRRPSYNNFYSTCLELFKFTIGMGDLEFTENYR
FKYVFISLLIVYVILTYILLLNMLIALMGETVSKIAQESKSVWKLQRAITILNIESSYWN
CIINPFRSGKQVLVGTTPDGKDDYRWCFRVDEVNWLTWNTTNLGIINEDPGGCGQDLKRN
LSFSLKPGRVSGKNWRTLVPILRDGKREGSLKPIAEDGTTADTEGPTEIRKKSLPNPVL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcatcctgggcaagatgcgcaagctgggcagctcggagctggaggagtcggac
gggggggcggaggaggcggccacggacggggaggactcggcctcggggacccccaacagc
accctgcgggcggccaagcacagcggaggcctctttgcccggcgggcccgcttcggcatc
ggggacggggacatggcccccatggactccttcttccaggtggaccagctggtctccagc
cccgtcctcaagttcagcctcagcctggagcgcgggaagtgcgggaaccactgctccaag
ctcttgtcctcggcgtccatcggcgtgcgggccgagaaggccttcaagatctacagccgg
cggcggctctttgacgcggtggcccagggcgaccccagcgacttggacgacctcttcctc
tatctgatggagaccatgaagaacctgaccgacgacgagttcaaggaaccggataccggg
aagacctgcctgctgaaggccatgctcaacctccacaacggctggaacgacaccatcccg
ctcttgctggacatcgccaagaagacggacaacctgaaggagtttgtgaacgccgagtac
accgacggctactacaagggtcagaccgccctccacatcgccatcgagaggcgcaactac
tacctggtggagctgctgctcaagaacggggcggacgtccacgcccgagcccacggggag
ttcttccagaacatcaagggccggccggggttctatttcggcgagctcccgctctccttg
gccgcctgcaccaaccagctcaacatcgccaagtacctcctggagaaccctttccagccg
gccgacatcgccgcccaggactccatgggcaacacggtcctccacgccttggtggagatc
gccgacaacaccgaggacaacaccaagttcgtcaccaacgtctacaacgagatcctcgtc
ctgggcgcccgcatcaaccccaccctcaagctggaggagatccccaaccgcaggggactc
accccgctgacgctggcagccaaggccgggaagatccaggtctttgcctacatcctccgg
cgggagatgaaggcgcccgagtgccgccacctctcccgcaagttcaccgagtgggcttac
gggcccgtccactcctcgctctacgacctctccagcatcgacacctgcgagaagaactcc
gtcctggagatcatcgcgtacagctccgagacgccgaaccgccacgagatgctcttggtg
gagcccctcaaccagctcctccaggacaagtgggaccgcttcgtgaagcacctcttctac
ttcaacttcttcacctacaccgcccacatcctcatcctcaccgtcgccgcctacttccgg
cccacgaaaaaggacggggtgcctccgttccccttgcgccacaccaccagcgaatacttc
cgggtcgccggggaaatcctgagcatcctgggaggagtctatttcttttttcgagggctc
aagtatttcaagcaccggcgcccgtctctgaaggcggtctttacggacagctacagcgag
ctccttttcttcttgcactcggtgctgatcctcacctcggcggtgctgtacttcagcagg
caagaggcctacgtgatcttcatggtctttgccctggcgctgggctggatcaacctgctg
tattacacccgcggctttcagcagatgggcgtctactccgtcatgctcgagaagatgatg
ctgagcgatctcttgcgcttcatcgtggtcttcctgctgttccacgtcggcttttcaaca
gcggtggtgaccctgattgaggaagacgacgagaagccggagggcctgaaccacacgtgt
gcgctgtgcgtgtggcaggccaagcggcggccctcgtacaacaacttctactcgacctgc
ctggagctgttcaagttcaccatcgggatgggcgacctggagttcacggagaactaccgc
ttcaagtacgtcttcatcagcctgctcatcgtctacgtgatcctgacctacatcctcctg
ctcaacatgctcatcgccctcatgggcgagaccgtcagcaagatcgcccaggagagcaag
agcgtctggaagctccagagagccatcaccatcctgaacatcgagagcagctactggaat
tgcatcatcaaccccttccggtccgggaagcaggttctggtgggaacgaccccggacggg
aaggacgactatcgatggtgcttccgagtggacgaggtgaactggttgacgtggaacacc
accaacttgggcatcatcaacgaggaccccggcgggtgcggacaggacctcaagcgcaac
ctcagcttctccctcaagcccggaagagtttcagggaagaactggcggacgctggtgccg
atcctgcgggacgggaagcgtgaggggtccctgaagcccatcgcggaggacggcaccacc
gccgacacggaaggcccgaccgagatccggaagaagtcgctccccaaccccgtcttatag
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