Anolis carolinensis (green anole): 100560227
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Entry
100560227 CDS
T01608
Symbol
eif4a3
Name
(RefSeq) eukaryotic translation initiation factor 4A3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03013
Nucleocytoplasmic transport
acs03015
mRNA surveillance pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100560227 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
100560227 (eif4a3)
03015 mRNA surveillance pathway
100560227 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100560227 (eif4a3)
03041 Spliceosome [BR:
acs03041
]
100560227 (eif4a3)
03009 Ribosome biogenesis [BR:
acs03009
]
100560227 (eif4a3)
03012 Translation factors [BR:
acs03012
]
100560227 (eif4a3)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100560227 (eif4a3)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100560227 (eif4a3)
mRNA cycle factors
Stress granule specific factors
100560227 (eif4a3)
Spliceosome [BR:
acs03041
]
Complex C
Other components
EJC/TREX
100560227 (eif4a3)
Ribosome biogenesis [BR:
acs03009
]
Eukaryotic type
90S particles
Helicases
100560227 (eif4a3)
Translation factors [BR:
acs03012
]
Eukaryotic type
Initiation factors
eIF-4
100560227 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100560227
NCBI-ProteinID:
XP_008100905
Ensembl:
ENSACAG00000014384
LinkDB
All DBs
Position
1:complement(254215901..254227893)
Genome browser
AA seq
410 aa
AA seq
DB search
MSGTTGGTTGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP
SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ
IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI
KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN
FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY
IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggacgacgggcggcacgacggggtcggcgcggaagcggctgttgaaggaggaa
gacatgacaaaggtggagttcgagaccagcgaagaggtggacgtcacccccaccttcgac
accatgggcctacgcgaggatctcctccgcggcatatacgcctacggctttgagaaacct
tcagctatccagcagagagcaatcaaacagatcattaaaggaagagatgtaattgcacaa
tcacagtcaggaacaggcaaaactgctacattttctatctctgtcctacaatgtctggac
atccaggttcgtgaaacccaggcattgattctggcacctactagggaattggcagtgcag
attcagaaggggcttcttgctcttggtgattacatgaatgtccagtgccatgcctgtatc
ggtgggaccaatgtgggcgaagatatcaggaagctggattatgggcagcatgttgttgct
ggcacaccagggcgcgtatttgatatgattcgccgcagaagtctgaggacgcgtgctatt
aaaatgttggttttggatgaagctgacgagatgctcaataaaggtttcaaggaacagatt
tatgatgtgtatagataccttccgccagcaacacaagtagttttgattagtgctactttg
ccacatgagatcttggagatgaccaacaaattcatgaccgaccctatccgcatcctggtg
aaacgtgatgaattgactctggaagggatcaaacagttctttgtggctgtagagagagaa
gaatggaagtttgataccttgtgtgacctgtacgacaccctcactatcacacaggcagtc
atcttctgcaacacgaagaggaaggttgactggctgacagagaagatgagagaagccaac
tttactgtttcatccatgcatggagacatgcctcagaaggaaagggagtccatcatgaaa
gagttcagatctggggcaagtcgtgtccttatttctacagatgtttgggccagaggcttg
gatgtacctcaggtttccctaatcattaactatgacttacctaacaacagagaattgtat
atacacaggattggtagatccggccgttatggccgaaaaggtgtggccatcaactttgtg
aaaaacgacgacattcgtattttgcgagacattgaacagtactattccacccaaattgat
gaaatgcccatgaatgtcgctgatcttatttga
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integrated database retrieval system
