Anolis carolinensis (green anole): 100560403
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Entry
100560403 CDS
T01608
Symbol
sf3b3
Name
(RefSeq) splicing factor 3b subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100560403 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acs03021
]
100560403 (sf3b3)
03041 Spliceosome [BR:
acs03041
]
100560403 (sf3b3)
03036 Chromosome and associated proteins [BR:
acs03036
]
100560403 (sf3b3)
Transcription machinery [BR:
acs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100560403 (sf3b3)
Spliceosome [BR:
acs03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100560403 (sf3b3)
Complex B
100560403 (sf3b3)
Complex C
U2 SnRNP specific factors
100560403 (sf3b3)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100560403 (sf3b3)
TFTC complex
100560403 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
100560403
NCBI-ProteinID:
XP_003227911
Ensembl:
ENSACAG00000001817
UniProt:
H9G5S6
LinkDB
All DBs
Position
Un
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANTG
DDWHVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFMHKTPVEEVPAAIAPFQGRIL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttataacctgacattgcagcgagccactggcatcagctatgccatccatggc
aatttttcaggaaccaagcagcaagaaattgttgtttcccgtgggaagatcctggagttg
cttcgtcccgatcctaataccggaaaggttcacactttgctgacggttgaagtctttggg
attattcgttccctcatggcctttaggctgactggtgggaccaaagactacattgtggtg
ggcagcgattcgggccgcattgttattctggaataccagccttccaaaaatgtctttgag
aagatccaccaagaaacctttggcaagagtggctgccgcaggattgtgcctggacagtac
ctggctgtggatcctaagggacgagccgtcatgatcagtgccattgagaagcaaaagctt
gtctacatcctgaacagagatgctgctgcccgcctgactatttcttccccactggaggcc
cacaaggccaacaccttggtttaccacgtggtcggagtggacgttggctttgagaacccc
atgtttgcctgcctggaaatggattacgaggaagccgacaatgaccccaccggggaagca
gcagccaacacccagcagacactgaccttttatgagttagatctgggtctgaaccacgtt
gtccggaagtatagcgagcccttggaggagcatggcaactttctcatcacagtccctggt
ggttcagatgggcccagcggggtcctcatttgctctgaaaactacatcacctacaaaaac
tttggtgaccagccagacatccgatgccccattcccagaagaaggaacgacttggacgac
cctgaaaggggcatgatcttcgtttgctctgcgacgcacaagaccaagtccatgttcttt
ttcctggctcagacggagcagggggacatcttcaagatcaccttggagacagatgaggac
atggtcacagaaatccgcctcaagtactttgacaccgttcctgtcgccgctgctatgtgt
gtgctgaaaacagggttcctctttgtggcctctgagtttgggaaccactacctctaccag
attgctcacctgggagacgacgacgaggagcccgagttctcctccgccatgcccctggag
gaaggcgacaccttctttttccagccccgaccactcaagaacctggtgctggtggatgag
ctggacagcctctctcccatcctgtgctgccagattgctgacctggccaatgaagataca
cctcaattgtacgttgcctgtggaaggggcccccggtcgtccctcagggtcctcaggcat
ggactagaggtctccgaaatggccgtctcggagttgcctggtaaccccaatgctgtgtgg
acggtgaggaggcacgttgaagatgagtttgatgcttacatcattgtatccttcgtcaac
gccaccctggtcctgtccatcggggagacggtagaggaagtgacagactccgggttcttg
ggcacgacccccacgctgtcttgctccttgctaggggaggatgccttggtgcaggtttat
cctgatggcatccggcacatcagagccgacaaacgcgtgaacgaatggaagacacctggg
aagaagaccattgtcaagtgtgctgtgaaccagaggcaggtggtgattgctctgactgga
ggagagctggtctactttgaaatggacccgtctgggcagctgaacgaatacacggagagg
aaggagatgtcggcggacgtggtctgcatgagcctggccaacgtaccccctggagagcag
cgctcccggttccttgctgtgggtttggtggacaacaccgtgcgcatcatttctctcgac
ccctccgactgcctccagcccctgagtatgcaggccctccctgcgcagccggagtcgctg
tgcattgtggaaatggggggcgcagagaagcaggacgagcttggggagaggggctccatt
ggcttcctctacctgaatatcggcttgcagaacggtgtgctgctccgaacggtcctcgac
ccagtcacgggagacctctccgacacaaggaccaggtaccttgggtcgcgccccgtgaag
ctcttccgcgtccggatgcaaggccaggaagcagtgctggccatgtccagccgctcatgg
ctgagctactcctaccagtcgcgcttccacttgaccccactttcgtatgaaacgctggag
tttgcctctggctttgcctcggagcagtgcccagagggcatcgttgccatctccacaaac
actctgaggattctggcgctggagaagctgggcgccgtctttaaccaggtggccttccca
cttcagtacaccccccggaagttcgtcatccaccccgagagcaacaacctgatcatcatc
gagaccgaccacaatgcctacacggaggcgaccaaggcccagcggaagcagcagatggcg
gaggaaatggtggaagctgcaggggaagatgagcgggagttagctgcagagatggcggct
gctttcctgaacgagaacctcccggagtccatttttggtgccccgaaggctgggaacggg
cagtgggcctcggtcgtgagggtgatgaaccccatccaggggaacactctggacctggta
cagctggagcagaacgaagctgcattcagtgttgcagtctgccgctttgccaacactggg
gatgactggcacgtgctggtgggggtggccaaggacctcatcctcaacccacgctctgtg
gccggaggcttcgtctacacctacaagctggtgaacaacggggagaagctggagttcatg
cacaagacccccgtggaggaggtgcctgccgccatcgctcccttccagggccggatcctg
attggtgtcgggaagctcctgcgggtctatgacttgggcaagaagaagctgctccggaag
tgtgagaacaagcacattgccaactacatctgtgggatccagaccattgggcaccgcgtg
atcgtgtccgacgtgcaggagagcttcatctgggtgcgctacaagcggaacgagaaccag
ctcatcatctttgcggacgacacccacccgcgatgggtcaccaccgcctgcctcctggac
tacgatacggtggctggcgcagacaagtttggcaacatctgtgtggtgaggctgccccca
aacaccaacgatgaggtggatgaggacccgacgggcaacaaggctctatgggaccgtggg
ctgctcaacggcgcctcccagaaggcagaggtgatcatgaattaccatgtgggggaaacg
gtgttgtccctccagaagaccaccctgatccccggaggctccgagtccctggtctacacc
actctctcaggaggcatcggcatcctggtccccttcacgtcacatgaggatcacgacttc
ttccaacacgtggagatgcatctccggtcggagcacccccctctgtgtggcagggaccac
ctcagcttccgctcctactacttccctgtcaagaatgtgatcgacggagacctctgtgag
cagttcaactccatggaacccaacaagcagaagaatgtctccgaagagctggatcggacc
cctccagaggtctccaagaagctggaggacattcgcacccgctacgccttctga
DBGET
integrated database retrieval system
