Anolis carolinensis (green anole): 100560430
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Entry
100560430 CDS
T01608
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting 13 homolog A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acs04131
]
100560430 (vps13a)
Membrane trafficking [BR:
acs04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100560430 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
100560430
NCBI-ProteinID:
XP_016846492
Ensembl:
ENSACAG00000005655
LinkDB
All DBs
Position
2:complement(45718198..45909070)
Genome browser
AA seq
3188 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVAFTHLEIKENALYQFDVPFKVKAG
HIGQLNLKIPWTNLYTQPVEAVLDEIFLLIVPTASIKYDAEKEEKQLFEAKQRELQRIED
AKQKIADQDNPQEEKQDTFIEKLITQVIRNLQLKISNVHIRYEDDITNKDLPLSFGVSLQ
NVSLQTSDENWNPCIQDATTKLFHKLVRLDNFFAYWNVKSEMFHHNSYKESLNHLKFGIA
SNGVIPDGYSFICRPISAKAKLRMNPRSDVDFSAPKLDLDVNLQDIAMELDKSQYFSIME
LLESIDMMTRNLPYRKFRPDVPVHGHAMEWWFYIVNGLIEVNVQPKLQMWSWEHIRYHRN
QVRSYKDLYKTKITSKKPLEITLIMLEDLEKTLDIFSITLARQQAEFEATKAGLKIYRLG
AKQDNEESKGWFGWMWDWVGKKIPESIQEPKGFEDLMSPEEKDKLYAAIGYSETAVDPTL
PKTYEAMKLSVKLLSMTAVIRENKEQPELIKIALIDLRTTVTQRPGAEAIRFELSVSAFE
VHGVAQGKTIPCLLSSHTVHSGTSTSLFTIMFETNPLEESANQKLRIESQPLEIIYDAMT
VNSLVDFLRRPGDVDLDQLAIATLTKLEELGEKTATGLVYIIETQKVLDLKINLMPSYII
VPQNGFYDSTSNKLLLDLGHLKMTSKNPSSLEELKVGESALEDIISRAYDKFDIQLSSIQ
LLYSRHYESWENARSLRSSSQHILQPLDVKMEFSRAMVVTDTRMPKYKVFGELPLLSFNI
SDEKLKCIMDLIDSIPKPETAQGTANTQPSKVQISPFLATPYMSTSVLPLLELHSTAGSS
ESEEEFYDAPSSPMDDVPFFEAPLGSWSSMSNVAQQAQKAVRRESLKNMVDLELRFEIYE
AFLQVCRLDVDVEQPVLRLEILKLGTELKLRTYDMYATVYLREVCLLCPEYMDDENKPVY
IISTLDNLVEDLLSVELIKADINAPDLSTTYNNILQLTKVNFSSIDIHLHTEALLNNMTF
LSNLIPSQEAAPVEFVQEKEEKKEVKKLTSNNSKYQDVCDLYVYAELSCLRIFIREQRRR
IAEICVEGLDSEVMMKKETTEISAKLKNIVIVDCDEAALYKKALYITGKEVFSFKMVTYM
FATEGVSYANVNAVDSRIYLIFGCIEIVYVNKFVSAILAFVNNFQTAKEAITEATVQAAE
KAATGVKELAEQSSRMALDIKIKAPVLIIPQSSVSPDVLVADFGLITIKNDFLFVKTKLR
CSIPPILDAIHVKLSELKVYRSRVVNDVLQNEIPLLQPLNLEVTVERNLAALWYNEIPDI
KISGRLKPMNLILSQSDITTILRTLNENLGDTGSLPPEPEKNDVSSNGTASASQQSGGGT
TVFTSAVVEMHSSVKVKTSLKLDFQVDSLTLVLYGPNSNQLPVQDERDDHLKLAECKLLL
ISAAVKMLSDDSMIASVRLNNCTLDDKRQTVQKATPRMIEMKQGSEKKIMVEISYKQGRD
GTTVLDTVVQDTYLCASIEFLLTIADVFLKATAESAAAQQNFFQTSAVKEQVPVQAESTM
GINVVVKNSEIVFVADLTRSDAPSLVTTAQCEISMKYGPNLYKMTAAVKDIYAKACPFLP
DMRKGNITTVLQPCDFFFEMIQEGNQPLKADLSVKSITIKVSPIILNTVMTITSAFFPAA
ETAEKDISPVPPNLWEKKDIKNFNLWFLEESSENKDLVSETELIPNGETLKMKIETLVVT
LEAGVGHRTVPMLLAKSSFSGDVKNWSSLINLSSRLELEVHYYNEIFGVWEPLLEPLEID
NSDEFRPWVLELKMKNKAKKTLVDSVAEEEHYKVPEYNTVITIYSQDQLNLTLSKCGLLM
LSNLGTAFAEAATQIFKKDQVPFVLKNSLGVPIIVLPSDSFSVLNDKPKGNSFYLEDGQN
LSMEYIRTKSDQDQFTAMTTLSGKLFYIWLTPQNHSTTDKIPLTKVGRSLYRVRHNDSGV
VRSIVCQIDTTEGSKMITVRSPIQIKNHFSIPLSVFEDGKCLGVALPEDEFSIPLTSYRS
LLFFKPMVDEHDVSEEYSSSEGISFDEMVKNFGKSLQKKCLPVKSSDHPLLINIVPMQDT
LTCSACTGDQWDLPYVVHLWPSVLLRNLLPYHISYSLEGDNMSYNILEDGCSAQIHNAVL
DETKLDLQLLNYLNKNWTAEYPIQTDQEEIGFITFSCITDLDNLELDIAMHVTYATGQMI
VAIHSPYWMVNKTGRMLQYKADGIHRKHPPEYKMPLLFSFQPKYFYNENKVQLMVTDSDL
SDHFSLDTVGSHGFVKCKGPKKDYQVGVTINNSSFNLTRIVSFTPFFMVTNRSTLTLEIA
EESNETWIPVHLQQCIPFWPEKNERKFRVKVENSDIPPKLIQYDKQENSLLLHLDNTLGG
IIVDITLAEHSTTIIFSDYHAGSAPFLIINHTKEEIIEYGQSSLSVMEDVLEPNKGMLYT
WADPVGSRKLKWKCEKINGEITPKDDLMTAIQVENKRIYLVSFFEGLQRIILFTEDEKVF
KVTYESEKVELAEQEILISLQDVGISLVDNYFKQEIVYIGITSSDVIWEAKPKKKSRWRP
LSLKLTEKLEKEFNEYCDHSPTDDKIVDLDDYIPVCLTPTGNNMKILQPSEIPVRRSFLP
ALKVQYSTSEHQSSFRVQIYRIQIQNQIPGAIFPFVFYPIKPPKSISLDSEPKPFTDVSI
VIRTAGHSEISRIKYFKVLIQEMDLRLDLGFLNALADFFTLAEEVPKDQEIELFKKDVEY
VQEELKNVSSTDTSQISLYEYFHISPIKLHLSFSLSTGREDSNKEEKRKELIPVQSVNLL
LKSIGATLTDVQDVVLKLAFFELNYHFCTTEQLQWAVIMHYSKQAIKQMYVLILGLDVLG
NPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASRITGA
MAKGMAAITMDEDYQQKRREAMNRQPSGIKEGLTRGGKGLVSGFVSGITGIVTKPIRGAQ
KEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKKATHTSDDITSLRPPRFFSDDG
VIRPYRLRDGAGSQMLQNIENGRFGKLRYIAHAMVNNTDLLMLTKSGILFVTRGTFGQLT
CEWQYTYDEFTKAPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFKTPHDAKWILSKLEE
ARESQSNV
NT seq
9567 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtggtggacgtcctgaaccgcttcctgggcgactatgtggtg
aacctggacagctcccagctcaagctcggcatctggggaggagctgtagcatttacacat
cttgaaataaaagaaaatgcactgtatcaatttgatgtaccgtttaaagttaaagcggga
catattggtcagctgaatttgaagattccatggacaaatctttacacacagcctgttgaa
gctgtgctagatgaaatttttttgcttattgtgcctacagcaagtattaaatatgatgct
gaaaaagaagaaaaacaactatttgaagcaaaacagagggaactgcaaagaatagaagat
gcaaaacagaagattgctgatcaagataatccacaagaggagaagcaagatactttcata
gaaaagctaatcactcaggtcatcagaaaccttcagttgaaaatttccaatgtccatatt
cgatatgaggatgatatcacaaataaagatcttccattgtcatttggtgtttcacttcag
aatgttagtttacagacttcagatgaaaactggaatccatgtatacaagatgcaacaacc
aaattgtttcataagcttgttcgattggacaacttctttgcgtactggaatgtgaagtct
gaaatgtttcatcacaatagctacaaagaatctttgaatcatttaaaatttggaattgca
agcaatggtgttattccagatggctacagtttcatttgccggccaatttcagctaaagca
aagctccgtatgaatcctcgatctgatgttgacttttctgcaccaaagctagatctagat
gtaaatcttcaggatatagccatggaacttgacaaatcacagtattttagtataatggag
ctccttgagtccattgatatgatgacccggaatctaccatacaggaagtttagaccagat
gttcctgttcacggtcatgccatggaatggtggttctatattgtaaatggccttattgaa
gtcaatgtccaacccaaactacagatgtggtcttgggaacatattcgttaccacaggaat
caagtgaggagctataaggacctatataaaacaaaaataacatcaaagaagcctcttgaa
atcactttgattatgctagaggacctagagaagacattggatatattcagcattactctg
gcaagacaacaggcagaatttgaggcaactaaggctggattaaagatttacagactaggg
gctaagcaagacaacgaagagtctaaaggctggtttggttggatgtgggactgggttgga
aagaaaatccccgaaagtattcaagaaccaaaaggttttgaagatttgatgagtccagaa
gaaaaggataagctctatgcagcaattggttatagtgaaacagctgttgacccaacattg
cccaaaacgtatgaagctatgaaactttctgtaaaactattaagcatgacagcagtgata
agggaaaacaaggaacagcctgaactgataaaaattgccttaattgatctgcgtacaaca
gtaacccaacggcctggtgctgaagcaataagatttgaattaagtgtaagtgcatttgaa
gttcatggagtggctcaaggaaaaacaataccctgtttgctgtcatcgcacacagtccat
tcagggaccagcacatcactctttaccatcatgtttgagaccaatccattagaggagagt
gccaatcagaagctaagaatagaatcacaacctttggaaataatatatgatgcaatgact
gtaaatagcttagtggatttcttacgacgtccgggtgatgttgatcttgatcagctggcc
atagcaactttaacaaaattggaagaattgggggaaaagacagctacagggctagtatat
attatagaaacgcagaaagttctagacttaaaaataaatctaatgccgtcctatatcatt
gtaccacaaaatggattctatgactcaacttcaaataaattacttttggatcttggtcat
ttaaagatgactagtaaaaatccatcttccttggaagaactcaaagttggtgaaagtgct
cttgaagatattatatcaagagcatatgacaagtttgacattcaactcagcagcatacag
cttctttatagcagacattatgaaagctgggagaacgctcgtagtctgcgatcatcatct
caacatattttgcagcctttggatgttaaaatggaatttagcagagcaatggttgtaaca
gatacaagaatgcccaagtacaaagtatttggtgaactaccactactgtcttttaacatc
tcggatgagaaattgaaatgtattatggatcttattgatagcattcctaaacctgaaact
gctcaaggcactgccaatacacaaccttccaaggtacaaatatctccatttctagcaaca
ccatacatgtcaacctctgtgcttccacttctagaactccattcaacagctggatcaagt
gaatctgaagaagaattttatgatgccccaagtagtcctatggatgatgtgccatttttt
gaagcccctctgggttcctggagtagtatgagcaatgttgcacaacaagcacaaaaagca
gtaagacgagaatctttgaagaatatggttgatttggaactacgatttgaaatatatgag
gcatttcttcaagtgtgccgtcttgacgtagatgttgaacagccagtccttcgcctagag
attttaaaattaggcactgagcttaagctaaggacctatgatatgtatgcgacggtttat
cttagagaagtttgcttattatgtccagaatacatggatgatgaaaacaagccagtttac
atcatttcaaccctggataatttagtggaagatcttctatcggttgagttaataaaggca
gatattaatgctccagacctgagtactacctataacaatatcctacagctgacaaaggtg
aatttttcctctatagatatccatttacacacggaagcacttctgaataatatgactttc
ttaagtaatctaattcccagccaggaagcagctccagtagagtttgtccaggaaaaagaa
gagaagaaggaagttaagaaattgacttcaaacaattcaaaataccaagatgtttgcgat
ctctatgtttatgccgaactgtcatgtttacgaatctttatcagagaacaaagacgcagg
atagctgaaatttgtgttgaaggtcttgatagcgaggtgatgatgaagaaggaaacaact
gaaatatcagctaagttaaagaatatagtcattgtggattgcgatgaggctgctctgtat
aaaaaggctctctatattactgggaaagaagtcttcagtttcaagatggtgacatacatg
tttgccacagagggtgtttcttatgcaaatgtgaacgctgttgacagccgcatttattta
atttttggatgcattgaaattgtttatgtcaacaaatttgtttctgctattttggctttc
gtaaacaattttcaaacagcaaaagaggcaattactgaagccactgttcaagctgcagag
aaagcagctactggtgtaaaggaattggctgaacagagttcccgaatggcactggatatt
aaaattaaagcacctgttctaataatcccacaatcgtcagtatctcctgatgtcctggtg
gcggattttggtttgatcaccataaagaatgactttttgtttgttaaaacaaaacttcga
tgtagtatcccaccaattcttgacgctatacatgtgaaattgagtgaactaaaggtatac
agatcacgtgttgtgaatgacgtattacaaaatgaaataccactgctacaaccattaaat
cttgaagttactgtagaacgcaatttagctgcactttggtataatgaaattcctgacatt
aaaatatctggacgcctcaagccaatgaatctgatcctcagtcaaagtgacattactact
atcttgaggaccttgaatgaaaatttgggagatactggttctttaccacccgaaccagag
aaaaatgatgtttcaagcaatggaactgcaagtgcttctcagcagtctggtggtggaaca
acagtgtttacatctgctgtagtggaaatgcattcctctgttaaagttaaaaccagtcta
aaattggatttccaggtcgattccctgactctagttttgtatggcccaaattccaaccag
cttcctgttcaggatgaaagagatgatcatttgaaacttgcagaatgtaaattgttgcta
atatcagctgctgtcaaaatgttatcagatgattcaatgattgcctcagtcaggttaaac
aactgcactttagatgataaacggcagacagtccaaaaagctacacccagaatgatagaa
atgaaacagggatctgaaaaaaagattatggtggagataagttacaagcagggaagagat
ggcaccactgttcttgacacagttgttcaggatacatatctttgtgctagcatagagttt
ctacttactatagcagatgtatttctgaaagctactgctgaaagtgctgctgcccagcaa
aacttttttcagacttcagctgtaaaggaacaagttcctgtacaggcagaatccactatg
gggataaatgttgtagttaaaaattccgagattgtatttgtggcagatttgacaagaagt
gatgctccttcattggtgacaacagcacaatgtgagatctccatgaagtatggccccaac
ctgtataaaatgacagccgctgttaaagatatatatgcgaaagcctgcccatttcttcca
gatatgagaaaaggcaatattactacggtattgcagccatgtgactttttttttgagatg
atacaagaaggaaatcaacccctgaaagctgatctctctgttaaatccataacaattaag
gtgtcacctattatcttgaatacagtcatgaccattacatcagcatttttcccagcagca
gagactgcagagaaggatattagcccagttccaccaaatctttgggagaagaaggatatt
aaaaattttaatttgtggtttctggaagaatcaagtgaaaataaagatcttgtttctgaa
actgaattgattcctaatggagagacactgaaaatgaaaattgagactttggttgtaact
cttgaagctggagttggtcacagaactgtgccaatgctcttagcaaagtcttcattttct
ggagatgtcaaaaattggagtagtctaattaatctctcatctcgtcttgaactagaggta
cattattataatgaaatatttggagtttgggagccattacttgaaccactggaaattgat
aacagtgacgaattcagaccatgggttctagaactgaagatgaaaaacaaagccaaaaaa
actttagttgattcagttgctgaagaggaacactacaaagtgccagaatacaatacagta
ataacgatttactctcaagatcagttaaaccttacactgtccaaatgtgggctactaatg
ttgagtaacttgggcacggcatttgcagaggcagcaacacagatcttcaaaaaagatcag
gtcccctttgtattaaagaattccttaggggtacccatcattgtcttaccaagtgattcc
tttagtgtcctaaatgataaaccaaaggggaattcattttatcttgaagatggacaaaat
ctaagtatggagtatatcagaactaaaagtgatcaagaccagttcacagcgatgactacc
ctgagcggcaaactattttacatttggctcactccccagaatcattctacaactgacaag
attccactgacaaaagtggggcgaagtctttacagagtaagacacaatgattctggtgtt
gtacggtcgattgtttgtcaaattgataccactgaagggagcaagatgataacagtacgc
tcacccattcaaataaagaatcatttttcaattcccttgagtgtttttgaagatggaaaa
tgtttaggagtggctttaccagaagatgaattcagcataccattgacctcttacagatca
ttattgtttttcaaaccaatggtggatgaacatgacgtttctgaagagtactcctcaagt
gaaggaattagttttgatgaaatggttaagaattttggcaaatcgttgcagaaaaaatgt
ctgcctgtaaaatcctctgatcatccactcctcatcaatattgttccaatgcaagatact
ttgacatgttctgcttgtacaggagatcagtgggatttaccatatgttgttcatttatgg
ccttctgttctgctccgcaatcttcttccttatcatattagttattccttagagggggat
aatatgtcatacaacattctggaagatggatgttcagctcagattcataatgcagtgtta
gatgagaccaagctggacttgcaattactgaattatctcaataaaaattggactgcagaa
taccccatccaaacggatcaggaagaaattggtttcatcacattctcctgcattacggac
cttgataacttagaactagatattgctatgcatgtaacatatgccacaggacaaatgatt
gttgcaattcacagtccatattggatggtaaataagactggtcgaatgctacagtacaaa
gcggatggtattcaccgaaaacatccacctgaatataaaatgccacttcttttttctttc
caacctaaatatttttacaatgaaaacaaggttcaactcatggtgacagatagtgatctt
tctgatcacttttctctggatacagttggcagtcatggctttgttaaatgtaaaggaccc
aagaaggactaccaagttggtgtcactataaataacagcagctttaatctcactagaata
gtgagcttcactcctttttttatggtcacaaacagaagcacacttacattagaaatagct
gaagaaagcaatgaaacatggataccagtacatttacagcagtgcattcctttttggcct
gaaaagaatgaaagaaaatttcgtgttaaagtagagaattctgatattccaccaaaactt
atccagtatgataagcaagaaaatagtttgctgctacatttagacaatacgcttggaggc
attattgtggatatcacactagcggaacattcaacgacaattatattttctgattaccat
gctggttcagctccattcctgataattaaccatactaaagaagaaattattgaatatggg
caaagctcactcagtgtaatggaagacgttttagaaccaaataaaggaatgctttacaca
tgggctgacccagtaggctctagaaaattgaaatggaaatgtgaaaagatcaatggagaa
ataacaccaaaagatgatttgatgacagctatccaagtggaaaacaaacgaatatattta
gtttcattttttgaaggattgcagcgtattatccttttcactgaagatgaaaaggttttc
aaagtgacatatgaaagtgaaaaagtagaattagcagaacaagaaatactcatctcctta
caagatgttggcatctctttagtagataactatttcaagcaggaaatagtttatattgga
ataacaagctcagatgtaatttgggaggcaaaacccaaaaaaaagtcaagatggcggcca
ctgagtttgaagctaacagaaaaactggagaaagaatttaatgaatactgtgatcactca
ccaacagatgataaaatagtggatctagatgattacatcccggtctgcttgactcctact
ggtaataacatgaaaatactacagccctcagaaatcccagtgcgaagaagttttttaccg
gctttaaaagtacaatatagtacatctgaacaccaatcgtccttcagagtccagatttat
aggatacagatacaaaaccagattcctggagccatatttccctttgtgttctatcctatt
aaacctcccaagtccatctccttggattcagaacctaaaccatttactgatgtcagtatt
gtcataagaactgcaggacattctgagatatcacgtataaaatattttaaagtcctaatt
caagaaatggatcttcgtttggatcttggcttccttaatgctttggctgatttttttaca
cttgctgaggaagtacccaaagaccaagagatagaacttttcaaaaaggatgtagaatat
gtacaggaggaactgaaaaatgtgtcatcaactgatacatcacaaatcagtttatatgag
tattttcatatatctccaatcaagttacatttaagtttttcactcagcactgggagagaa
gatagcaacaaggaagaaaaacgtaaggagctgattccagttcagtctgtgaatctgttg
ttaaagagtattggagcaacactcacagatgtgcaggatgttgtccttaagttggcattc
tttgagctcaactatcacttttgcactacagagcaactgcagtgggcagttattatgcat
tattcaaagcaggctataaaacaaatgtatgttcttattcttggactggatgttttgggc
aatccatttggattcatacgagatttgtcagaaggagttgaggccttcttctatgaacct
tatcagggagcaatccagggtccagaagagtttgttgagggaatggctctgggacttaaa
gccttagtcggtggtgctgttggtggattagctggtgctgcatcaagaataactggtgct
atggctaaaggaatggcagccataactatggatgaagattatcaacagaaacggcgagaa
gccatgaataggcaacccagtggtattaaagagggcctcactcgtggaggaaaaggccta
gtatctggttttgttagtggaataacaggaatagtgacaaagccaataagaggcgctcag
aaagaaggagcagcgggcttcttcaaaggcgttggaaaaggtttagtaggagcagtggca
agacccaccggaggaataatagatatggcaagcagcacttttcagggaattaaaaaagct
acacatacatctgatgatattaccagcctgcgtcctccccgcttcttcagtgatgatgga
gttattcgcccctatcgattaagagatggcgctggaagtcagatgttacagaacattgaa
aatggaagatttggaaaactgagatacattgcacatgcaatggttaataatacagatttg
ctaatgttaacaaaaagtggtatattgtttgtgacaagaggtacatttggacaattaaca
tgtgaatggcaatatacatatgatgaatttaccaaggcgccattcattgttgatgggcgg
aggttgcgcattgaagcaaaggaacgtgtaaagtctgtgttccatgccaaagagtttggg
aaaataattaattttaaaacaccacatgatgccaagtggattctctcaaagctggaagaa
gcgagggaaagccaatcaaatgtatga
DBGET
integrated database retrieval system
