Anolis carolinensis (green anole): 100561016
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Entry
100561016 CDS
T01608
Symbol
pnldc1
Name
(RefSeq) PARN like, ribonuclease domain containing 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100561016 (pnldc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100561016 (pnldc1)
Enzymes [BR:
acs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100561016 (pnldc1)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100561016 (pnldc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
100561016
NCBI-ProteinID:
XP_008121494
Ensembl:
ENSACAG00000013667
UniProt:
G1KP33
LinkDB
All DBs
Position
1:complement(212140008..212172697)
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AA seq
529 aa
AA seq
DB search
MDICASQFEERLPELQELLSGCDFVGLDMEFTGLRSVLPDRQPSFFDSPAEWYQKARQSI
QQFTVSQLGLSIFCRETSTKYVAHSYNFFLFPTTFGQIDSELSFQASSIQFLSHYGFDFN
KFLKDGIPYMNETQEKKMEHLVPGSWMVRSGFGKDKLKKVIEEVTCWVSSAEEKDSMVLH
DLYDFQMFEVQLILRQAIKDIWTIPLGDHKVLVKKMNPHQRWLLENTSYDSCQKEQIILC
AKGFTNLFQALVKAKKPLVGHNMMMDLLHLHEKFYNPLPENYEEFKKNMHTLFPIILDTK
NISKSIWKEFQFPQASSLSEVYEELCSVINTTNQSCPEIFHARDCLRYTTKMCLHEAAYD
AFLCGSVLLKIAHLLFCNISCDNTRAASYFSQYLDVLSTYVNQVNLIRASIQKINFSGLD
DHTKHLPLLIANVRRWPGVNEEQIHRELGIFCRFDVRRLRMNQFLLLSNRLRNIRMVLEE
YKTHPNLQISLYYYWRHAPEVNCFLQICGIVVSWSLLAFFLGGSSSCAV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggatatctgcgcctcgcagttcgaggagaggctgcccgagttacaggagctcctctcg
ggatgcgattttgtcggtcttgacatggaattcacaggtttacgttcagtcctaccagat
agacagcccagtttctttgattcacctgccgagtggtatcagaaagccaggcagagtatt
cagcagtttacagtgagtcagcttggcttgtcgatattttgtcgtgaaacatcaactaag
tatgtggcccattcatataactttttcctcttccctacaacatttggccagattgattca
gagttgtctttccaagcatcaagcatccagtttctatctcactatggttttgactttaat
aagtttcttaaagatggaattccatacatgaatgaaacacaggagaaaaaaatggaacat
cttgtacctggtagttggatggtccgtagtggttttggcaaagataagctgaagaaggta
attgaagaagttacttgctgggtatcttcagcagaagagaaagattccatggttctacat
gatctgtatgactttcagatgtttgaagtacagctgattttaagacaagctattaaagat
atttggactatccctttaggagatcataaagtgctggtgaaaaagatgaatccacaccag
cgttggctgctggagaacacttcttatgactcttgtcaaaaagagcaaattattttgtgt
gcaaagggctttaccaatcttttccaggcacttgttaaagccaaaaagccgctggtggga
cacaatatgatgatggatcttttgcatctgcatgagaaattttacaatccgcttcctgag
aactatgaagagtttaaaaagaacatgcacactctgtttcccatcatcttggacacaaaa
aatatttcaaagtccatttggaaggaatttcagtttcctcaagcttctagcctttcggaa
gtttatgaagagctttgcagtgtcataaatacaacaaaccagtcttgtccagaaatcttt
cacgcaagggattgcctcagatacaccacaaagatgtgtctccatgaagcagcgtatgat
gcattcctctgcggatcagttcttcttaaaattgctcatttgctcttttgcaacatttct
tgtgataacacaagggctgcctcctatttttcccagtacctcgacgttttatctacatat
gtgaatcaggtgaaccttatccgagctagtattcagaaaattaatttttctggcctggat
gaccatacaaaacacctcccgcttctgatagctaatgtacgaagatggcctggagtgaat
gaagagcaaatccatcgagagttaggaatcttctgcaggtttgatgtgcggcggctaaga
atgaaccagtttctcttgctgtccaatagacttagaaacatcaggatggtgctggaagaa
tataaaacccatcccaacctacagatttctctctattactactggaggcatgccccagaa
gtgaactgtttcctccaaatttgtggcattgttgtgtcttggtctttgctagccttcttc
cttggcggctcctccagttgtgctgtgtga
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