Anolis carolinensis (green anole): 100561164
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Entry
100561164 CDS
T01608
Symbol
ptchd1
Name
(RefSeq) patched domain containing 1
KO
K24682
patched domain-containing protein
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acs04990
]
100561164 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
acs04990
]
Other domain-containing proteins
Patched domain-containing proteins
100561164 (ptchd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
100561164
NCBI-ProteinID:
XP_003218887
Ensembl:
ENSACAG00000007519
UniProt:
G1KGP6
LinkDB
All DBs
Position
3:125466634..125554481
Genome browser
AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRSSFARLGHFVASHPVFFASAPVLLSILLGASFSRYRVEGSVEHLLAPKH
SLARIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVVVTSFVKANMLDQHHADLILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKSCIVDDIVHILKELKAARMSNQTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESNFCDTVELF
QKSNRNVTMYPFTSSSLQEDFQKTSIVSERYLTTSLVLVVTLAMLCCSMQDCVRSKPWLG
LLGLLTVSLATLTAAGIINLTGGKYNSTFLGIPFIVLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARLFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTAKFSEDTAESEETNSYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVNEESDLRNIVATATRTME
YTAAQQKYFSNYSPVIGFYIYESIEYWNITVQEDMLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDILRNSFLKAPQFAHFSEDIIFSKKYNNEVDIVASRMFLVAKTMDTKREE
LYHLLETLRKLSLKSKVKFIVFNPSFVYMDRYASYMGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVDLDCISVLCLIYGINYTVDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFVPPSKKKRKEKKTPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcctgcacagggggctgagatcgtcgttcgccagactcgggcacttc
gtggccagccacccggtcttcttcgcctcggcgcccgtcctgctctccatcttgctgggc
gccagcttcagccgctaccgggtggagggcagcgtggagcacctgctggcccccaagcac
agcctggccaggatcgagcgcaacctggtcaacagcctcttcccggtcaaccgctccaag
caccggctctactccgacctgcagacgcccgggcgctacgggagggtcgtcgtcacctcc
ttcgtcaaggccaacatgctggaccagcaccacgccgacctgatcctcaagttgcactct
gctgtgaccaggatccaagtacaaagaccaggtttcaattacacatttgcccatatctgc
atcctaaataatgacaagtcttgcatagtggatgatattgtgcacatcctgaaggaactg
aaggctgctcgcatgtctaatcaaacaaattttgccatcacatacccaatcacgcactta
aaggatggcagggaagtgtacaatggacaccaacttggcggtgtcaccgtccacagcaaa
gaccgggtgaagtctgctgaagccattcaactcacatattacttgcaggcaatcaactcc
ctgaatgatatggtggcagaaaaatgggaatccaacttctgtgacactgttgaacttttc
cagaaatccaaccggaatgtcacgatgtatcctttcacttcatcatctcttcaagaagat
ttccagaagacaagcatagtgtcagaacgctacctgaccacaagcttggtccttgtggta
acgttggccatgctttgttgttccatgcaagactgtgtccgcagcaaaccctggcttggt
ctccttgggttgttaactgtgagtttggccactctcactgcagctggaatcattaatctg
actggtgggaaatacaattctaccttcctgggaattcccttcatcgtattaggtcatgga
ttatatggaacttttgaaatgttgtcctcctggaggaaaactagagaagaccaacacgtg
aaagagagaactgcagctgtatttgcagactccatgctttccttttctctcaccactgcc
atgtatctggtcacctttggaataggtgccagccccttcactaacattgaagcagccagg
ctcttctgctgcaattcctgtattgcaattttcttcaactacctctatgtgctctccttt
tatggttccagcctcgtgtttactggctacatagaaaacaactaccagcatagcatcttc
tgcagaaaggtaccaaagccagaggtcttgcaagagaagcctgcctggtataggtttctt
ctgacagccaaattcagtgaggacactgcagagtcagaggagacaaacagttatgaaagt
caccttttggtgtgtttcctcaagcgttattactgcgactggataacgaacacatatgtc
aagccttttgtagttctcttttaccttatttatatttcctttgccttaatgggctacctg
caggtcaatgaagagtcagaccttaggaacattgtagcaactgcaacacgaacaatggag
tacactgcagctcagcagaaatacttcagcaattacagcccagtcattgggttttatatc
tatgagtccatagaatactggaacataaccgttcaagaggacatgctagagtacaccaag
ggatttgtgcggatatcttggtttgagagctatttaaattaccttagaaaactcaacata
tcaactggattacccaaaaagaatttcacagatattctaaggaactccttcctgaaagca
ccccagtttgcccatttttcagaggatatcattttttccaagaaatacaacaatgaagtc
gacattgtggcctctcgaatgttcctggttgctaagactatggatactaaacgagaagag
ctttatcatctcctggaaaccttaagaaagctctctctcaagtccaaggttaaattcatt
gttttcaacccatcatttgtatacatggatcgttatgcctcctatatgggagcccccttg
caaaactcctgcattagtgctttattcctgctcttcttctctgcgtttctggtggcagac
tctctcatcaatgtatggctcacactcactgttgcctcagttgaatttggagttataggt
tttatgaccttgtggaaagtcgacttggactgtatttctgtattgtgcttaatttatggg
attaattatacagttgacaactgtgcacctctcttgtcaacctttgtcctgggcaaagat
ttcacaagaactaaatgggtaaagaatgccctggaagtgcacggggtagctattttacag
agctacctctgctacattgttggtctaattcctctcgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttgatagcattagtcaccttctttcattgctttgcc
attttacctgtgatactgacttttgtgccaccatccaagaaaaaacggaaagagaagaaa
actcctgagaaccgggaggaaatagagtgcgttgaaatggtggatatggatagtactcga
gtggttgaccaaatcacaacagtctga
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