Anolis carolinensis (green anole): 100561220
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Entry
100561220 CDS
T01608
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat domain 37
KO
K12600
superkiller protein 3
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100561220 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100561220 (ttc37)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100561220 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_11
TPR_16
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_8
ANAPC3
TPR_9
TPR_15
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
RPN7
TPR_6
TPR_30
BTAD
Fis1_TPR_C
TPR_Slam
ARM_TT21_5th
TPR_5
DUF3788
Motif
Other DBs
NCBI-GeneID:
100561220
NCBI-ProteinID:
XP_003216413
Ensembl:
ENSACAG00000013091
UniProt:
G1KNB5
LinkDB
All DBs
Position
2:complement(25830859..25873239)
Genome browser
AA seq
1566 aa
AA seq
DB search
MSNKGSESSTEKCQRGIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGLAAAELEQPDQAQ
GAYRKATELEPGQLLAWQGLANLYEKTNGADVREDLVNVYQKLLELYESTDKQKWCDICR
KLVDLYQQEKKYPQVARMWHKLIKIRREEGADNSELHQLWKRLIQSLEEGTHVQDNETQQ
LLLNAHEEAVNSTEPIPSEEHQKLYGEFVECLSKLPHEYAKLKTACEDMMRLYPTASYPL
EVLCLHFIQSGSLNEEALNYCQKLLGVDSRSGPALIALGIQLLHEKKYDKAEKSLTEGLQ
QTSQCPVAWCYLGEVQVKMHKYKEAVHSCNQALRMLGQLYEASSLQQHKERACCFKAVAL
LRLPGSDAADEAINSLDQVLDKNNNPKCIALKGQAYLNKGLTGEASKIAQELKVTHPDLA
EADYLEGLIQYKEKNYSQAETSFQRAIEKETEMADFHFCLGLTYWFMSEETRKDKSKALT
QFLKAAKLDNYLGSAFYYLGQYYRDIAGDKNRALGCYKKAFEKDRTDGDAGAAVVDLSTE
LGDLDTALSILAEVTERASAGRAKWAWLRRGLYYLRAGQHSQAVADLQAALRADPKDANC
WESLGEAYLSRGGFTTALKSFRKARELNPKSIYSIYKAAAIEQILGKYKEAIAEYQHILK
KSKDYVPALKGLGECYLMMAKTALADYLDGKALDYIEQSLGFLARAAKHRPEASCLWKLL
GDACTCVCVITPSKVNVKTLGFLIGQDTDKCLLKKSDLLSLGGRCYGRGLKLMSSPNTWC
DLGINYYHQAHHLSATGSSKNEISELLEKSLQCLKKAVRIDSKTHLYWNALGVVSSSKGV
GNYALAQHSFIKSIQADQINVVAWTNLGVLYLTSGNIEQAHEAFKVAQSLEPSYLTCWIG
QALIAETVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKGNRNTELYRYNILQMN
AIPAAQIALTKYTERIQNDACAFTMLGYLNEYLQLKKQAGDAYQRAVLLLKNCEDKEKYN
IAMRNYGRSLCVLGHYDDAIQAYLSTGLSEFDDILGIALAYFKKGDCQESQKAYEKAISM
VDCEQDKAYILTALAIMGYKQNQVDDAKTLLFKCSILQKPNIESLQALCTLGLIKQDATL
ATAALKELLKHAERKDDIFMRCLLTSAVYALQGRNQAVQRQVSRTIHSNPDNPALWSLLS
RLVPQYTPKNAKGGAVAGTVAHIHDLNHGKKALLNTAVNQLAIGCHTAENEKNNALKNIQ
KAIHLSPDDPAAWSVLLAACHSENTVVCLHNTQPKMRNLEKMIVATISAKTKEKELPVSY
AQALEEWSLFEAITGLSETGRTSEAEALCTKGLQTFPEQPTLYLLLRQVQYKPLLQSHKE
FPDSVLEELQKAVMSNSTSITAWHWLAEVYHSQGMMVAAEMCFRKSLQLASQQGSWSGKL
SSLLRLAKLALEICMANISNDHWPLLVQEATAEALKLTFCPLGVLLQALLQYNRKMGSRE
ARRMLERVVYQPGYPETIVSVARWYLLRHLYAKDDYELIDALVANAKAHRDVRALDLNNK
LAATAS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaagggaagtgaaagcagcactgaaaaatgccagagaggcataagaaataaa
gaatacaaagaagcactgaaacactgcaagacggtcctgaaacaagaaaaaaataactac
aatgcctgggtattcattggcctagcagctgctgagctggaacaacctgaccaggcccaa
ggtgcctacaggaaggccactgaacttgaaccagggcagttgctggcatggcagggactg
gcaaatttgtatgaaaaaacaaatggtgcagatgtgagggaggacttggttaatgtttac
cagaaactcctagaactctatgaaagcacagataaacagaagtggtgtgatatctgtaga
aaacttgtagacctgtatcagcaagaaaaaaagtacccgcaggtggctcgaatgtggcac
aagctgataaaaataagacgggaagaaggtgcagacaattctgagcttcatcagctctgg
aagagactgattcagtcactggaagaaggcacacatgtccaggataatgaaacacagcag
ttgctccttaatgcacatgaagaggctgtgaattccacagagccaattccaagtgaagaa
caccagaagttatatggagagtttgttgagtgtttatcaaaactccctcatgaatatgct
aaactgaagacggcttgtgaagatatgatgcgtctctacccgactgcgagttatcctctg
gaagttctttgcttacacttcattcaatcaggcagcttgaatgaagaggccctgaattat
tgtcagaagctattgggcgttgattcaagaagtggtccagctcttattgctttaggaatt
cagttgctccatgaaaagaaatatgacaaagctgaaaaaagtctaacagaaggtttacaa
cagaccagtcagtgtccagtagcatggtgctacttaggagaggtacaggtgaaaatgcac
aaatacaaagaggctgttcattcttgcaatcaagccttaaggatgttaggacaactttat
gaagccagttcccttcagcaacacaaagaacgtgcctgttgtttcaaagcagtggccttg
cttagacttccaggctctgatgctgcagatgaagcaataaattcccttgatcaggttttg
gataaaaacaacaatccgaagtgtatagctcttaaaggacaggcatatctaaataaagga
cttactggggaagcttcaaagattgcacaggaacttaaagtgacacatcctgatctggca
gaagccgactatcttgaaggattgattcagtacaaagaaaagaactattctcaggcagaa
acaagtttccagagagctattgaaaaagaaactgaaatggctgactttcatttctgcctg
ggcctcacttactggtttatgagtgaagagacaagaaaggataaatcaaaggctctcact
cagtttttgaaggcagcaaaactggacaattacctaggaagtgctttctattacttaggt
caatactacagagatatagctggagataaaaacagagctcttggctgctacaaaaaggct
tttgaaaaagatagaaccgatggtgatgctggagcagcggtagtggatttgagcactgag
cttggagacttggacactgctctttctatcttggcagaagtgacagaacgagcaagtgct
gggcgagcaaagtgggcttggcttcgtcgtgggctttattacctgagagctggtcagcat
tctcaagcagtggcagatttgcaggcagctcttcgagcagatccaaaggacgccaactgt
tgggaatctcttggagaggcatatttgagcagaggcggcttcacaacagctctaaaatct
ttccgaaaggccagagaacttaaccccaaatctatatatagtatttataaggctgcagca
attgaacagattctaggaaaatataaagaggctattgcagaatatcagcatatcttgaag
aaatcaaaagattatgtccctgcactgaaaggtttaggagaatgctatctcatgatggca
aagactgctcttgctgactatttggatggaaaagctctggattatatcgagcaatccctt
ggatttttagcaagagctgcaaagcaccgcccagaagcatcttgcctttggaaattgctt
ggagatgcctgcacttgtgtttgtgttattacaccttccaaagtgaatgtgaaaacatta
ggattccttattggtcaggacacagacaaatgtttgctgaagaaaagtgacctgctcagt
ttgggaggaaggtgttatggaagaggattaaaattgatgtcctcaccaaatacatggtgt
gatctcggaattaactactatcatcaggcgcatcacctttcggcaacaggcagcagcaag
aatgagatcagtgaactgttagagaagtctttacagtgtcttaaaaaagcagttagaata
gacagtaaaacccatctttactggaatgctcttggagtggtgtcaagctccaaaggtgtt
ggaaactatgcccttgctcaacattcgtttattaaatctattcaagctgaccaaattaat
gttgttgcctggaccaatttgggagtcttgtatttaaccagtggaaacatagagcaagca
cacgaagccttcaaagtagcccagtctctggaaccctcctacctaacgtgttggattggg
caggctctcattgcagagactgtgggcagctatgaaactatggatctcttcaggcatact
actgaactcagcatgcatactgagggagcaaaaggttatgcccattgggtgtgttcaacc
ctacaagacaaaggcaacagaaacactgaattgtatagatacaatattcttcagatgaat
gccatcccagcagcccaaattgctctgaccaaatacacagaaagaattcaaaatgatgcc
tgtgcgtttacaatgcttggctatttaaatgaatatctccaactaaaaaaacaggcagga
gatgcttaccaaagggcagttctgttgttgaaaaattgtgaagataaagagaaatacaac
atagccatgagaaattatggcagatcactgtgtgttcttggtcattatgatgatgcaatt
caggcttacttatcaactggtctctcagaattcgatgatattttgggaattgccttggct
tacttcaagaagggagactgccaagaaagtcagaaagcttatgaaaaagcaatctccatg
gttgattgtgagcaagacaaagcatatatcctcacagccctggcaatcatgggatacaaa
cagaatcaagtagatgatgctaagaccctcttatttaaatgttctatattacagaaacca
aatatagaaagtctgcaagctttgtgcactttagggctgataaagcaggatgctacactt
gcaacagcagcacttaaagaattattaaagcatgcagaaagaaaggatgatatttttatg
aggtgccttttgacatctgctgtctatgcattacaaggcaggaatcaggctgttcaaaga
caagtttcaagaactattcacagtaacccagataatcctgctttatggtctctcctgtct
cgactggtacctcaatatacaccaaagaatgcaaagggtggggcagtggcaggaactgtt
gctcatattcatgatttaaaccatggaaagaaagctttgttgaataccgcagttaatcaa
ttggctataggatgtcacacagctgaaaatgagaagaacaatgcattgaaaaatatccaa
aaggcaatccatctttccccagatgatccggctgcttggtcagtgctcctagctgcttgt
cattctgaaaacactgttgtttgtctgcataatacacagccaaagatgagaaacctggaa
aaaatgattgtagccacaatctcagcaaaaactaaagaaaaggaactcccagtttcctat
gcccaagctcttgaagagtggtctcttttcgaagctattactggcttaagtgagaccggg
agaacttcagaagcagaggctctctgtacgaagggattacaaacttttcctgagcaacca
acattgtacctgcttttaaggcaagttcagtacaagccacttttgcagtctcacaaagag
tttcctgattctgtcttggaggagcttcaaaaggcagttatgtccaactccacttcaatt
acagcctggcattggctcgcagaagtttatcattcccaaggaatgatggttgctgcagag
atgtgtttccgaaaaagtttacagctggcatcccagcagggtagctggagtgggaagctc
tctagcctactaagacttgctaagcttgccctggaaatctgcatggctaacatttcaaat
gatcactggccattactggttcaagaagccacagcagaagctttgaagcttactttctgt
ccactgggtgttctgctacaagctcttcttcagtacaaccgcaaaatggggtcaagggaa
gctcgtcgcatgttggagagagtggtatatcaacctgggtatccagaaaccatagtatca
gtagcccgatggtatctcttaagacacttatatgccaaagatgattatgaactaatagat
gcccttgtagcaaacgccaaagctcatagagatgttcgggcattggatctaaataacaaa
cttgcagcaacagcatcctaa
DBGET
integrated database retrieval system
