Anolis carolinensis (green anole): 100561554
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Entry
100561554 CDS
T01608
Symbol
dhx16
Name
(RefSeq) DEAH-box helicase 16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100561554 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100561554 (dhx16)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100561554 (dhx16)
Spliceosome [BR:
acs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100561554 (dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
100561554 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
Cas3-like_C_2
PWI
AAA_30
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100561554
NCBI-ProteinID:
XP_008103817
Ensembl:
ENSACAG00000010952
UniProt:
G1KKU7
LinkDB
All DBs
Position
2:complement(192115812..192148175)
Genome browser
AA seq
1060 aa
AA seq
DB search
MAGELERWVSGQLHTLLGLSERHVVAFMVGLATRSRTPDDLLARLEETETLRLSDPSARA
FAQQLWERIPRQAPRERPARAAEQEALALQQKNRSYTLLEDSDEEEPGEAKAARGSKRQH
PPRGPEGKQRKRHKHLRQRQKEEDDDKDSDEDTREDRERKQAASTMKEEEEEDEWDRSER
ERLQDLEERDAFAERVKRKDKEKTRNILERSDKKAYEEAQKRLKMAEEDKKLMVPELRKK
SRWDYLAKREKDKIEDLEAEIADDEYLFSEQELTALEKQELDYKRKVRDLAKQYKQAGEQ
EKMEKSNRYYMPEETRSKKIPDRYEEPQSEDHLAPQDEQRRWEEDHIGAAALRFGARDAG
QRHPHKDYEYVLEEDEMIQFVNAVQMRGTSQNKSQEEKPELSEAERKKLSIQEVRRSLPI
FPYRKDLLSAIAEHQILIIEGETGSGKTTQIPQYLFEEGYTEKGMKIGCTQPRRVAAMSV
AARVSQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLSSYSVVIIDE
AHERTLHTDILFGLIKDIARFRPELKVLIASATLDTERFSTFFDDAPIFRIPGRRFPVDI
FYTKAPEADYLEACVVSVLQIHVTQPRGDILVFLTGQEEIEACCEMLQDRCRRLGSKIAE
LLVLPIYANLPSDMQAKIFEPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYN
ARTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLG
NVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVD
PMLSKMILASEQYKCSEQILTIAAMLSVNNAIFYRPKDKVVHADNARMNFFLPGGDHLVL
LNVYSQWVECGYSMQWCYENFIQFRSMRRARDVREQLEGLMERIEVDITSSEGDYIPVRK
AITAGFFYHTARLTRTGYKTVKHQQTVFVHPNSSLFEEQPRWLIYHELVFTTKEFMRQVI
EIDSTWLLEVAPHYYKSKELEDASTKKLPKKVGKTREELR
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggagctggagcgctgggtctccgggcagctgcatactttgctgggactcagc
gagcggcatgtggtggccttcatggtgggcctggctacccgcagccgcactcccgatgac
ctcctcgcccgcctcgaagagaccgagaccctccgcctgagcgacccctccgcccgcgcg
ttcgcccagcagctatgggagcggattccccgccaggcaccacgggagcgcccagccaga
gcagcagagcaggaggccttggccttgcaacagaagaaccgctcttacactctgctggag
gacagtgatgaggaagagcctggtgaggcaaaagcagcccgtggctccaagcgtcagcat
cctccacggggccccgaaggcaaacagcggaagcggcacaaacacctgaggcagcgccag
aaagaagaggacgatgacaaagactctgacgaggacaccagagaagacagggaacggaaa
caggctgcatccaccatgaaagaggaagaagaagaggatgagtgggatcggagcgagcga
gagcgattgcaggacttggaagagcgggatgccttcgcagagcgtgtgaaacgcaaggac
aaggagaagacgcgcaacatcctagagcgttcagacaagaaggcctatgaagaagctcaa
aaacgtctgaagatggcagaagaggacaagaaattaatggttccagagctgcgaaagaag
tctcgctgggattatttggccaaacgggaaaaggataagatagaagacttggaagcagag
atagcagatgatgaatacctgttctctgagcaggagctcacggccttggagaaacaggag
ctggattacaaacgcaaagtgcgtgacttggcgaagcagtacaaacaggcaggagagcag
gagaagatggagaagagcaatcgctactatatgcctgaggaaactcgcagcaagaaaatc
cctgatcgttacgaggaaccccagtcggaggatcatttggccccacaagatgagcaacgg
cgctgggaggaagaccacattggggcagccgccctccgctttggggctcgggatgctggc
cagcgccatcctcacaaagactatgagtacgtgctggaagaggatgagatgattcagttt
gtgaatgctgtacagatgcggggcacaagtcaaaacaagtcccaggaagagaagccagag
ctgtcggaggccgaacgcaagaagctctccatccaggaggtgcgccggagcctgcctatc
ttcccttaccgcaaagacctgctgtctgccattgccgaacaccagatactcatcattgaa
ggggagaccggctctggcaagaccacccaaataccccagtacttgtttgaagagggctac
acagaaaaaggaatgaagattggctgcacccagcccaggcgagtggcggctatgagtgtt
gctgcccgggtttcccaggaaatgggcgtcaagcttggaaatgaagtgggctatagcatc
cggtttgaggactgcacctcagagcggacagtgctgaagtacatgacggatgggatgctg
ctaagagaattcctcactgaacctgacctcagcagttacagtgtcgtcatcatcgatgag
gctcacgagcgcactttgcacacagacatcctctttgggcttatcaaggacattgctcgc
ttccggccagagctgaaggtgctgattgccagcgctaccctggacacagagcgcttctcc
actttctttgatgatgctcccatcttccgcattcctgggcgcaggttccctgttgacatc
ttctacaccaaggccccggaggctgactacctggaggcctgcgtggtgtcagtgctgcag
atccatgtcactcagccccgaggagacatccttgtcttcctcactggccaggaagaaatt
gaggcatgctgcgagatgctgcaggatcgctgccgccggctgggatccaaaatcgcagaa
ctgttggttctcccaatctatgccaacctcccctctgacatgcaggccaagatctttgag
ccaaccccaccaggagccaggaaggtagtcgttgctacaaacattgcagagacctctctg
accatagacggcatcatctacgtgatcgatcctggtttttgcaagcagaagagttacaac
gctcgcacaggcatggagtcactcattgtcactccctgctctcgggcttctgccaatcaa
cgagcgggcagggctggccgggtggctgcgggaaagtgcttccgcctctacacagcctgg
gcctacaagaacgagatggaagaaaccacagtgccagagattcagaggaccaacttgggc
aatgtggtactgcttctgaaaagcttgggcattaatgacttgatccactttgacttcatg
gacccaccaccacatgagactctggtcctggcactggaacagctctatgccctgggggcc
ctcaaccatcttggcgaactgaccaagctgggccggaaaatggcagagctccctgtggat
cctatgctctccaagatgatcctggcttctgaacagtacaagtgttcagagcagattctc
accatcgccgccatgctttcagtcaacaatgccattttctaccggcccaaggacaaagtg
gtccatgctgacaacgcccgcatgaatttcttcctgcccggtggagaccatcttgttctt
ctcaatgtttacagtcagtgggtggagtgtggttattccatgcagtggtgctatgagaac
ttcatccagttccgctccatgaggcgagccagggacgtgcgagaacagctggaaggactg
atggaacgcattgaagtggacatcacttccagtgagggagactacatcccagtccgtaag
gccatcactgctggtttcttctatcacacggcccgtctcacccgcaccggttacaagaca
gttaagcaccagcagacagtgtttgtccacccaaacagttctctgtttgaagaacagcca
cggtggctcatctatcacgaactggtcttcacaactaaagaattcatgagacaggtcata
gagattgacagcacgtggttgctggaggtggcccctcactactacaagtcgaaggagctg
gaagatgcttctaccaagaagctgcccaagaaagtagggaagacgcgagaggagcttaga
tag
DBGET
integrated database retrieval system
