KEGG   Anolis carolinensis (green anole): 100561657
Entry
100561657         CDS       T01608                                 
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03030  DNA replication
acs03410  Base excision repair
acs03420  Nucleotide excision repair
acs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100561657 (rfc4)
   03410 Base excision repair
    100561657 (rfc4)
   03420 Nucleotide excision repair
    100561657 (rfc4)
   03430 Mismatch repair
    100561657 (rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acs03032]
    100561657 (rfc4)
   03036 Chromosome and associated proteins [BR:acs03036]
    100561657 (rfc4)
   03400 DNA repair and recombination proteins [BR:acs03400]
    100561657 (rfc4)
DNA replication proteins [BR:acs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100561657 (rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100561657 (rfc4)
Chromosome and associated proteins [BR:acs03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100561657 (rfc4)
DNA repair and recombination proteins [BR:acs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100561657 (rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100561657 (rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_assoc_2 AAA_11 AAA_16 AAA_22 AAA_30 DUF815 AAA_24 Mg_chelatase RuvB_N SLFN-g3_helicase AAA_14 DNAX_ATPase_lid Cdc6_lid TIP49_C AAA_5 AAA_28 AAA_19 bpMoxR ResIII Viral_helicase1 AAA_7 AAA_3 HrcA_DNA-bdg
Other DBs
NCBI-GeneID: 100561657
NCBI-ProteinID: XP_003225743
Ensembl: ENSACAG00000007640
UniProt: H9GCW3
LinkDB
Position
Un
AA seq 364 aa
MQAFLKGPSSISTKPLPAKEKGTAATAGGSGEGKRVRPLPWVEKYRPKCMDEVAFQEEVV
AVLKKCLQGADLPNLLFYGPPGTGKTSTILAAARELFGTELFRQRVLELNASDERGIQVI
REKVKRFAQLTVSGSRSDGKLCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPITSRCSKFRFKPLSDKIQRQRLVEVAEKENVAVSSEAISYLVHVSEGDLR
KAITLLQSATRLMGGKEVTEKIVTEIAGVIPREMLDGVLASCQSGSFEKLEAVTKNLIDE
GYAATQLINQLHDVIVEREDLSDKQKSIIAEKLAEVDKCLVDGSDEFLQLTSLCAVVMEQ
LQNS
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcaggcatttctgaaaggcccatcttcaatcagtaccaagcccttacctgccaaggag
aaggggacagctgctactgcaggaggcagcggagaggggaagagggtccggcctcttcct
tgggtggaaaaataccgtccaaaatgtatggatgaagttgcatttcaagaggaagttgtt
gcagttctgaagaaatgcttgcaaggagctgatcttcccaatctcttgttttatggccca
cctggaactgggaaaacgtcaactattttggcagcagctagagaactctttgggactgaa
ttgtttcggcaacgagtccttgagctgaatgcctctgacgaaaggggaatacaagtcatt
agagaaaaggtgaagaggttcgctcagctgacggtgtctggaagtcgttcagatggcaag
ctgtgcccccctttcaagattgtaatcttggatgaagccgattctatgacctcagcagct
caggcggctttaaggcgcaccatggagaaggaatccaaaacaacacgtttctgcctgatc
tgtaattacatcagccggataatcgaacctataacgtctcgatgctctaaatttcgtttc
aagcccctttcagacaaaatccaacggcagagactcgtagaagttgctgaaaaggagaat
gttgcagtcagcagtgaggccatctcgtacctggttcatgtgtcggagggagacttgaga
aaggccatcacgctgcttcagagcgccacacgactgatgggtggaaaagaagtcacggaa
aaaattgtcacggaaattgcaggggtcatccctagagaaatgctggatggggtacttgct
tcctgccagagcggttcgtttgaaaaactggaagctgtaacgaagaacctgattgatgaa
ggatatgcagctacacagcttatcaaccaacttcatgatgtcattgttgagagagaggat
ctcagcgacaagcaaaaatccattattgcagagaagcttgccgaggtagacaagtgcttg
gttgatggttctgatgagtttttgcagttgaccagcctttgtgcagtggtgatggagcaa
cttcagaatagctaa

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