Anolis carolinensis (green anole): 100562005
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Entry
100562005 CDS
T01608
Symbol
msh2
Name
(RefSeq) mutS homolog 2
KO
K08735
DNA mismatch repair protein MSH2
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100562005 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acs03400
]
100562005 (msh2)
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100562005 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
100562005
NCBI-ProteinID:
XP_008100910
Ensembl:
ENSACAG00000013917
LinkDB
All DBs
Position
1:254690361..254809505
Genome browser
AA seq
953 aa
AA seq
DB search
MAADFSLNSASSPSSSSAAASPREGCWPEGTVAETGFVRAVLSLPEKPSTTIRFFERGDY
YTVHGTDAFLAASEVFKTRGVIRALGKGPRTLDSVALSKSNFESFLRDLLLVRQYRAEVY
KNKAGNKSTKESEWYLAYKGSPGNIAQFEDVLFGNHDISSSVGVMGIKLLSADGQKVVGV
GFVDTLMRKLEVCEFVDNEQFSNLEALLVQMGPKECLLPMGENGADMEKLRQVIQRGGIL
ITNKKKSDFLPKDITQDLNRLLRSKKKEHVSSAALPEMDKQVAISSLAAAIKYLELLNDD
SNFGQFELSTFDLNQYMTLDHAAARALNLFPGSSGNTQSTQSLSGLLNKCKTPQGQRLVN
QWIKQPLMDKNKIEERLNLVEAFVEDAELRQSLQEDILRRFPDFSRIAKKFQKKATLQDC
YKIYQSVNQIPNVIHVLGKTDGNHDMLLEAVFIRPLKELHSDFSNFQMMIEETLDMNTVE
NHEYLVKPSIDPNLAGIRKVMDKLEEKMRGALKTAASELSLEAGKSIKLECNAQYGHHFR
ITYREEKVLRNNLKYKVLETQKNGVKFSNIALKDLNEEYIKNRKEYEEMQDVVVKEIINV
ASGYKEPIQRLNDVIAQLDAVVSFAQASNAAPMPYVRPTILEKGEGGIVLKAARHPCIEV
QDDVSFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQAGVIVLMAQIGCFVPCDSADITI
VDCILARVGAGDSQLKGVSTFMAEMLETSSILRTATENSLIIIDELGRGTSTYDGFGLAW
AISEYIATKIGAFCMFATHFHELTALDEEIPTVNNLHVTALTTDDTLTMLYRVKKGVCDQ
SFGIHVAELAAFPKHVIENAKAKALELEEFQSIGNPEGKEEDGDGEPAAKKCYREKEEGE
KIIQDFLTKVKAMPLEDMSETDIQTKLKELKNEVLAFNNSFVNEILSRTKVVS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacttcagcctgaattctgcctcctcgccgtcctcctcctccgccgccgct
tccccgcgcgagggctgctggcccgaggggacggtggcggagacgggcttcgtgcgcgcc
gtgctcagcctcccggagaagcccagcaccaccatccgcttcttcgagcggggcgactac
tacaccgtccacggcaccgatgccttcttggcggcttcggaggtcttcaagacacggggc
gtcatccgggcgctggggaaaggaccccggacgcttgatagtgttgcccttagcaagagt
aatttcgaatcatttttgagagatcttctcctggtgcgtcaatacagggctgaggtgtac
aagaacaaagcaggaaacaaatccaccaaggagagtgaatggtacctggcctacaagggt
tctccagggaacattgcccaatttgaggatgttctgtttggcaaccatgacatatcctca
tctgttggtgttatgggcattaagctgttgtcagctgatggacaaaaagttgttggagtt
gggtttgtagatactttaatgaggaagctggaagtatgtgagtttgtagacaacgaacaa
ttttcaaatcttgaagctctgctagttcagatgggaccaaaggaatgtttgctacctatg
ggagaaaatggtgcagatatggagaagctgagacaggtcattcaaaggggaggaattctg
attacaaacaagaaaaaaagtgattttttaccaaaagacatcactcaagatctcaaccgt
ttattgagatcaaaaaagaaagagcatgtgtctagtgcagcattgcctgagatggacaaa
caggttgccatctcttccttggcagcggcaattaagtatttagagctcttaaatgatgac
tctaattttggacagtttgaactctctacctttgacctcaaccagtacatgacacttgat
catgctgctgccagagcccttaaccttttcccgggttcatcaggtaacacccaaagtaca
cagtctctatctggattgttaaataagtgcaaaacacctcaaggacagaggctggtgaac
cagtggatcaaacagcccttgatggacaagaacaaaatagaggaaaggttaaatttggtt
gaagcctttgtagaagatgcagagctaaggcagtctcttcaagaagacatcctccgtcga
tttccagacttcagtcgaatagcaaaaaaatttcagaagaaggccactttgcaggattgt
tacaaaatataccagtctgttaatcagatacctaatgtgattcatgtactgggcaaaact
gatggaaaccatgatatgctgttggaagcagtgtttataaggcctcttaaggagctacac
tcagatttctctaatttccaaatgatgattgaagaaactttggacatgaatacggttgag
aatcatgaataccttgtgaagccttctattgatccaaaccttgctggcataagaaaagtc
atggacaaattagaagaaaaaatgcgaggtgcactgaagactgcagcctcagagctaagt
ctggaagctgggaagagcatcaaattggaatgcaatgctcagtatggacatcatttccga
attacctacagagaggagaaggttctgcgaaacaatctcaaatataaggtgctggaaaca
cagaagaatggagtgaagttctccaacattgcattgaaagacttgaatgaggaatacata
aagaacagaaaggagtatgaagaaatgcaagatgttgttgttaaagaaatcatcaatgtt
gcatcaggttacaaagagcctatacaacgcctgaacgatgtcatcgcccagctggacgct
gtggtcagctttgctcaagcctctaatgcggcaccaatgccatacgtgcgccccacaatt
ctggaaaagggggaagggggcattgtgctgaaagctgcgagacacccttgcattgaggtc
caagatgatgtttccttcatccccaatgatgtgacctttgagaagggcaagcagatgttc
catatcattactggtccaaatatgggagggaagtcaacctacatccgacaagctggtgtc
attgttcttatggctcaaattggatgttttgtgccatgcgattctgcagatataacaatt
gtcgattgcatccttgcacgagtaggagctggagatagtcagctgaaaggagtgtctacc
ttcatggcagaaatgttggagacatcttccatccttcgaactgcaacagaaaattccctg
ataatcatcgatgaattggggagaggaacatctacatatgacgggtttggattagcctgg
gcaatctcagaatatattgccactaaaattggagccttttgcatgtttgccactcatttc
catgaactgacggcactcgatgaagaaattccaactgtgaataacttacacgtcacagca
ctaaccacagacgacaccctcacaatgttgtaccgtgtgaaaaaaggggtttgcgatcag
agctttggtatccatgtagcagagctagctgcttttcccaagcatgtaatagagaatgcc
aaggcaaaggctctggagttagaggaattccagagtattggaaaccctgaaggaaaagag
gaggatggtgatggggagccagcagccaagaaatgctacagagagaaggaggaaggtgaa
aaaataatccaggatttccttactaaagtgaaagcgatgcccctggaagatatgtctgag
acagacatccagaccaaactgaaagaactgaaaaatgaggttctagcatttaacaacagc
tttgtaaacgaaatcctttcccgaacaaaagttgtgtcataa
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