Anolis carolinensis (green anole): 100562328
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Entry
100562328 CDS
T01608
Symbol
smarcb1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03082
ATP-dependent chromatin remodeling
acs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100562328 (smarcb1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100562328 (smarcb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acs01009
]
100562328 (smarcb1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acs03021
]
100562328 (smarcb1)
03036 Chromosome and associated proteins [BR:
acs03036
]
100562328 (smarcb1)
Protein phosphatases and associated proteins [BR:
acs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100562328 (smarcb1)
Transcription machinery [BR:
acs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100562328 (smarcb1)
SWI/SNF complex
100562328 (smarcb1)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100562328 (smarcb1)
PBAF complex
100562328 (smarcb1)
SWI/SNF complex
100562328 (smarcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
100562328
NCBI-ProteinID:
XP_003230741
Ensembl:
ENSACAG00000007478
LinkDB
All DBs
Position
Un
Genome browser
AA seq
385 aa
AA seq
DB search
MMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERK
KIVASSHESQRSHSPRRYHGYTTLATSVTLLKACEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRSSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctggaggag
gacggggagttctacatgatcggatccgaggtggggaactacctgcgcatgttccggggc
tccctctacaagcgctacccgtccctctggaggcgcctggccactgtcgaggagcggaag
aagatcgtggcctcctcccacgagtcccagcggagccacagcccacgcagataccatggc
tacaccactctggccaccagcgtcaccctcctgaaggcctgcgaagtggaggagatcctg
gacggaaacgacgagaagtacaaggccgtctccatcagcacagagccccccacctacctc
agggagcagaaggccaagcgcagcagccagtgggtgcccacgctgcccaacagctcccac
cacctggacgccgtcccctgctccaccaccatcaaccgcaaccgcatgggccgcgacaag
aagaggaccttccccttgtgcttcgacgaccacgatccggccgtgatccacgaaaacgcc
tctcagccggaggtgctggtcccgatccggctggacatggagattgatgggcagaagctg
cgggacgccttcacctggaacatgaacgagaaactgatgaccccagagatgttttcggag
atcctgtgcgacgacctggacctgaacccgctgacctttgtcccggccattgcctcggcc
atccggcagcagattgagtcgtatcccacggacagcatcctggaggaccagtccgaccag
agggtcatcatcaagctgaacatccacgtggggaacatctccctggtggaccagttcgag
tgggacatgtccgagcgggagaactccccggagaagttcgccctgaagctctgctcggag
ctcggcctcggaggggagttcgtcaccaccatcgcctacagcatccgcgggcagctcagc
tggcaccagaagacctacgccttcagcgagaaccccctcccgacggtggagatcgccatc
cgcaacacgggggacgccgaccagtggtgcccgctcctggagaccctgaccgacgccgag
atggagaagaagatccgcgaccaggacaggaacaccaggcgcatgaggcgtctggccaac
acggctccggcctggtag
DBGET
integrated database retrieval system
