Anolis carolinensis (green anole): 100562407
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Entry
100562407 CDS
T01608
Symbol
msh6
Name
(RefSeq) mutS homolog 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100562407 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acs03400
]
100562407 (msh6)
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100562407 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
T3SS_ATPase_C
HVO_0758
Motif
Other DBs
NCBI-GeneID:
100562407
NCBI-ProteinID:
XP_008100917
Ensembl:
ENSACAG00000014084
UniProt:
G1KPH8
LinkDB
All DBs
Position
1:255181075..255205336
Genome browser
AA seq
1324 aa
AA seq
DB search
MSHQSSLLSFFPKSGRRRGSDSDDEEGAGSSSRPPRNKRGTANLPPAECDFCEFTPGDLV
WAKLEGYPWWPSLVYKHPTDGTLFRGRGRASRIHVQFFDDDPSRGWVSLRYLRPYAGSTG
RDTQRGGMFYSSRYEIKRAMELADAAMEKDKSERLELAVCDKPSESEEDEDEMEVSDEGE
EFSATKGAKHRNKRTVGRQQHHGKAKKRKLNDLDSDHEGSDMEFKPDQASSDENSPGRGE
SEISDTEFDPEKKKKRHIKVSPKPFIKPTQEKEYRLPPKEIPKNDILETPSREINLSCEI
MYKLASFAAPDCYDYRPNINGGGEDGSPSVWEHDKIEWLKDGKRKDANRRRQNDPDYDPS
TIFVPEDYLKNCTPGMRKWWELKSQYFDCVLFYKVGKFYELYHMDAVVGVSKLGLAFMKG
TWAHSGFPEIAYDRFSNTLVQKGYKVVRIEQMETPEMMEARCKSMAHPTKYDRVVHREVC
RIISKGTQTYSILDGDFSDTHSKYLLCIKEKCDDSAGLHYTYGVCFVDTTVGKFYLGQFL
DDRHCSRLRTLLAHYPPVQILFERGNPSGETQKILKSLLPSSVQEGLIAGSQFWKASKTL
KTLIEEDYFQDKENPNSGVVLPPVIKSMTAESDSLGLTPGENSELALSALGCCIYYLKKC
IIDKDILSMAKFEEYVPVDIDIGKEIKTSSIFAKTNQRMVLDGVTLANLEILENATGSPE
GTLLERIDTCCTPFGKRLLKQWLCAPLCNPCAINDRLDAVENLLAEAARVSEIRDHLKKL
PDLERLLSKIHSIGFSLKNPNHPDNRAVMYEEGRYSKKKILDFLSALEGFKVVVEIISIL
EDVVDSFTSKILRQTVTLKSKNPEGCFPDLTEELKKWDAAFDHTTARKTGVINPKPGFDS
DYDKAVEDITNIEEYLRQYLEEQRKRLGIRAMMYWGAGKNRYQIEIAETAVPRDLPNDYV
LKSSRKGYKRYWTKDTEKMLNKIVNAEERRDAAQKACMKRLFYDFDKNSRDWQAAVDCIA
VLDVLQCLAHHSQGCDGPVCRPIILLPDENTPPFLELENSRHPCITKTFFGDDFIPNDIF
IGVKDVKGNSEAKAPCILVTGPNMGGKSTLMRQAGLLVIMAQLGCFVPAESCRLTPVDRV
FTRLGASDRIMSGESTFFVELSETSSVLRHATEHSFVLMDELGRGTATFDGTAIANAVVK
ELSENIRCRAMFSTHYHSLVEDYTRCPSVQLGHMACMVENESEDPSQETITFLYKFIKGA
CPKSYGFNAARLADIPEEVIQKGHKKAKEFERITHSLKAFRNLCRIADGAPLIKDDLKKS
LLHV
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccagagcagcctcctcagcttcttccccaagtcggggagaaggcgaggcagc
gacagcgacgacgaggaaggcgcaggcagctccagcaggcctccccggaacaagcgcggc
accgccaacctcccgccggcggaatgtgacttctgtgaatttacgcccggtgatttagtt
tgggccaaacttgaaggatacccatggtggccatctcttgtgtacaagcatccaacagac
ggaacacttttccgggggagaggaagagcatctcgcatccatgtgcagttttttgatgat
gacccatcaaggggctgggttagccttagatacctaagaccatatgcaggttctactggc
agagatacccaaaggggaggtatgttttacagttcaagatatgagattaagagagcaatg
gaactggcagatgctgctatggaaaaagataaaagtgaacgacttgaactggcagtgtgt
gacaaaccttcagaaagtgaggaagatgaagatgagatggaggtgagcgatgagggtgaa
gaattttctgcaacaaagggagcaaaacatagaaataaaagaacagttggacgacaacag
catcatggaaaagccaagaagagaaagcttaatgatttagatagtgatcatgaaggttca
gacatggagtttaagcctgatcaagcgagcagtgatgaaaatagccctggaagaggtgaa
agtgaaatttctgacactgagtttgatccagaaaagaaaaaaaaacgtcatattaaagtc
tctcctaaaccattcattaaaccaacacaggaaaaggaatacagacttcctccaaaggaa
attcctaaaaatgacattcttgaaactcccagcagagaaattaatctttcctgtgagatt
atgtataaattagcatcttttgcagctcctgactgttatgattatcgtccaaatattaat
ggaggaggagaagatggtagtccatctgtgtgggaacatgataaaatcgagtggctcaaa
gatggtaaaaggaaagatgctaataggagacggcagaatgatccagattatgacccaagt
actatttttgtgccagaagactaccttaagaactgtaccccaggaatgcggaaatggtgg
gagctgaagagccagtactttgattgtgttctcttttataaagttggaaagttctatgaa
ttgtatcacatggatgctgttgttggagttagcaagcttggactggcattcatgaaaggc
acttgggcccactcgggtttcccagaaatagcctatgacaggttctccaatacactagtt
cagaaaggttacaaagttgttcgtattgagcagatggagactccagagatgatggaagca
cgctgtaaatccatggctcacccgacaaaatatgatagagttgtgcacagagaagtatgc
aggatcatttctaaagggacacagacctacagtattctggatggtgacttttcagacacc
cacagcaaatacctcctttgcataaaagaaaaatgtgatgattctgctggactccattat
acctatggagtatgtttcgttgatacaacagttggaaagttctatttgggacagttcctg
gatgaccgccattgctcgaggcttagaactcttttggctcattatcctcctgtgcagatc
ctctttgaacgggggaatccctcaggagaaacacagaagatattgaaaagtttacttcct
tcttctgtacaagaaggcttgattgcaggctcacagttctggaaggcatctaaaacatta
aaaactctcattgaggaagactacttccaggacaaggaaaatccaaatagtggagtagtt
ctgcctccagtaatcaaatccatgacagcagaaagtgactcattaggacttactcctggg
gaaaacagtgagcttgctttgtcagcacttggttgttgcatttactaccttaaaaaatgt
attattgacaaggatatcttatcaatggcaaaatttgaagaatatgttcctgtggacatt
gatattggaaaagaaataaagactagtagcatttttgctaaaacaaaccagaggatggtg
ctggatggcgtgactctagcaaacctggaaatattggagaatgccactggttcaccagaa
ggcacattgctggaaaggattgacacatgctgtacaccatttggaaagaggctcctgaaa
cagtggctctgtgcaccattgtgtaatccttgtgccatcaacgaccgcctggatgcagtt
gaaaatcttttggcagaagctgccagagtgtctgaaattcgggaccatcttaaaaagctc
ccagacctcgagaggcttctcagcaaaattcacagcattggtttttcacttaagaacccg
aatcacccagataacagggccgttatgtatgaggaaggcagatacagcaagaagaagata
cttgactttttgagtgcattagaaggatttaaagttgtagtagaaataatctcgattttg
gaagatgttgttgatagttttacgtccaaaatattgagacagacagtgacactcaaatct
aaaaacccagaaggctgtttcccagatctaactgaggaacttaagaagtgggatgctgcc
tttgatcatactactgcacgtaagactggtgtaattaatccaaaacctggctttgactca
gactatgataaagctgtagaggatataactaatattgaagaatatcttcgccagtatttg
gaagagcagcgcaaaaggcttgggatcagagccatgatgtattggggagcaggcaaaaat
cgttatcaaattgagattgctgaaactgcagttccacgggatttacctaatgactatgtg
ttgaagtcaagcagaaaagggtacaagcgttactggaccaaagatacagagaagatgctg
aacaagattgtcaatgctgaagagcggagggatgcagcacagaaagcttgtatgaaaagg
ttattctatgactttgataaaaacagcagagattggcaagcagcagtagattgcattgca
gtattagatgtcttgcagtgcctcgcccatcatagtcagggatgtgacggacccgtgtgt
cgacctataatcttgctgccagatgaaaatacaccaccatttctggagctcgaaaattca
cgccatccatgtatcacaaaaacattttttggggatgacttcataccaaatgatatcttc
ataggggtaaaggatgtcaaggggaactctgaggcgaaggcaccatgcattctagtgact
gggccgaacatgggaggaaagtctacactcatgagacaggctggactgttggtaataatg
gcccagttgggatgttttgtgccagctgaatcttgcaggctcactcctgttgatagagtc
ttcaccagattaggggcttcagatagaattatgtcaggggaaagcacattctttgtggag
ctgagtgagacctccagtgtgctacgacatgctacagaacattcctttgttctcatggat
gaattaggtcgaggtacagctacatttgatggaactgccatcgcaaatgctgttgtcaaa
gaactttcagagaatataagatgccgcgcaatgttttcaacacattaccattctttagtt
gaggactatacccgctgtccctctgtgcagttgggacacatggcatgtatggtggaaaat
gagagtgaggatcctagtcaagaaacaatcaccttcctctacaaatttattaaaggggct
tgccccaaaagctatggttttaatgctgcaagacttgctgacattccagaagaagttatt
cagaagggtcataaaaaagcaaaagaatttgaaagaattactcattcattaaaagcgttt
cggaatctctgtcggatagccgatggtgcaccgttaatcaaagatgatcttaagaagagt
ctgcttcacgtttga
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