Anolis carolinensis (green anole): 100562409
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Entry
100562409 CDS
T01608
Symbol
tmc1
Name
(RefSeq) transmembrane channel like 1
KO
K21988
transmembrane channel-like protein
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100562409 (tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acs02000
]
100562409 (tmc1)
03037 Cilium and associated proteins [BR:
acs03037
]
100562409 (tmc1)
Transporters [BR:
acs02000
]
Other transporters
Pores ion channels [TC:
1
]
100562409 (tmc1)
Cilium and associated proteins [BR:
acs03037
]
Other cilia and associated proteins
Stereociliary proteins
100562409 (tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TCAD2
COX16
Motif
Other DBs
NCBI-GeneID:
100562409
NCBI-ProteinID:
XP_008101587
Ensembl:
ENSACAG00000012478
LinkDB
All DBs
Position
2:complement(47987804..48077918)
Genome browser
AA seq
846 aa
AA seq
DB search
MVNMLKLFHQDGRFSGCKEEVEVDNDEGSDAESEEEEEFPQKREASRKNREKKDGEEEEV
EDGETAADRRKKYKKRRLKDAGIDVAQYEETCKSRKNQAKDGGDLKKSKKRKKRKGKKRK
GSSSDSESEEELTEEELAKLKEALEEKKKLIATLRNKSWKMKKKLEVLKDAQDFVEKFEG
ALGKGKNKQFYAFKVMMSKKWIKFQRDFDNFKTACIPWERKIKEIESHFGSSVASYFIFL
RWMYGINIILFGLTFGLIMVPEALMAKPYGSIPRKTVPRAEEAGAMNFATLWDFSGFAQY
SVLFYGYYNNQRTIGWLKFRLPLSYFLVGVGAIGYSFMVVIRTMAKNAHDDGGGDDNSFN
FSWKMFTSWDYLIGNPETADNKFASITTSFKEAIVEEQESRRDENIHLTRFLRVLANFFA
LCTLAGSGYLIYFVVRRSQKFALEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISALEN
YHPRIALRWQLGRIFALFLGNLYTFIIALMDEINLKLEEEMIVKQNMTIWLANLYNGTVP
ENVTGPPLDVDPADVPRGPCWETMVGQEFVRLTVSDTVTTYITILIGDFLKAVFVRFFNY
CWCWDLEYGFPSYSEFDISGNVLGLIFNQGMIWMGAFYAPCLPAINVIRLHTSMYLQCWA
VMCCNVPHARVFKASRSNNFYMAMLLFILFLSTLPVVYTVVSIPPSFDCGPFSGKTRMFE
VIGETLEHDFPSLFRKFFNLASNPGVILPFILLMVLSIYYLNATSKGYKAMNLELKKKLQ
SQAEENKRKNKERALKARENQQISMEPQANPKDKEKGESKSKKDGQQEGKPSVTNGGAPP
PRITVS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacatgctgaagctattccaccaggatggcagattcagtggatgcaaagaggaa
gttgaagttgataatgacgaaggtagtgatgctgaaagtgaagaagaggaagaatttcca
cagaaaagagaagccagtcgaaagaacagagagaaaaaagatggggaggaagaggaggtg
gaggacggagagactgctgcagatcgcaggaaaaaatacaaaaaaaggcggttgaaggac
gctggaattgatgttgctcaatatgaagaaacctgtaaaagcaggaaaaaccaagcaaag
gatggaggggacttaaaaaaaagcaagaaaaggaagaaaaggaaaggcaaaaagagaaaa
gggtcaagctctgattctgaatctgaggaagagcttacagaggaggaacttgctaaactg
aaagaagcactggaagagaaaaagaagctaatcgccacactgagaaacaaatcttggaaa
atgaagaagaaactggaagttttgaaagatgcccaggattttgtggaaaaatttgaaggg
gctcttggaaaaggcaaaaacaaacagttctatgcttttaaagtgatgatgtcaaagaaa
tggataaaatttcaacgtgattttgataattttaaaacagcctgcataccctgggaaagg
aaaataaaagaaattgaaagtcactttggctcttcagttgcatcttatttcattttcttg
cgctggatgtatggaataaatattattctgtttgggctgacttttggtctcatcatggtg
cctgaggctttgatggcgaagccatatgggagcataccaagaaaaactgtgccaagagcc
gaagaagcaggtgctatgaactttgcaactttgtgggactttagtggttttgcacaatat
tccgtcctcttttatggctactacaataaccagagaacaattggctggctgaagttccga
ctgcctctgtcctactttttggttggagttggggccattggttacagtttcatggttgtc
atccgcacaatggcaaagaatgcacatgatgacggtggaggtgatgataatagttttaac
tttagctggaaaatgttcacaagctgggattatttgattggcaatcctgaaacagcggac
aacaaatttgcatcaataacaactagcttcaaggaagcaattgtagaagaacaagaaagc
cgaagagatgagaacattcacttgacccgtttcctgagagttcttgctaatttcttcgcc
ttgtgtacactggctgggagtggttacctcatctattttgttgtgaggcgatcccaaaaa
tttgctttggaaggccttgaaaattatggctggtgggagagaaatgaagtgaacatggtc
atgtccctcctgggaatgttttgtccaactttatttgatgtcattagtgccctggaaaac
tatcaccctcggatagcacttcgttggcaactggggcgcatctttgctctcttcctgggc
aacctgtacactttcattattgctctcatggatgaaatcaatcttaagttggaagaagag
atgattgtgaagcagaacatgaccatttggttagctaacctgtacaatgggacagtgcct
gaaaacgtcactggtcctcccctcgatgtggaccctgcagatgtccctagaggcccatgt
tgggaaaccatggttgggcaggaatttgtccggttgacagtctctgacactgtgacaacc
tacatcacaattttaattggtgatttcctaaaagctgtctttgtcaggtttttcaattat
tgctggtgctgggacttggaatatggctttccctcatactcagaatttgatattagtgga
aatgtgctgggtctgatcttcaatcaaggcatgatctggatgggtgctttttatgcacct
tgccttcctgcgatcaacgtcatccgtctccatacttccatgtacctgcagtgttgggct
gtgatgtgctgtaatgtcccccatgcaagagtcttcaaagcctcaagatcaaacaacttt
tacatggccatgctgctattcattctattcctctccacgttgccagttgtctacactgta
gtctccataccaccatcttttgattgtggtccattcagcggaaaaactagaatgtttgaa
gtcattggagaaaccctggagcatgattttccttctttgtttcggaaattttttaatctt
gcctcaaatcctggtgtgattttacccttcatactgctgatggtcttgagtatctactat
ctcaatgctacctcaaaagggtacaaggcaatgaacttggagctgaagaagaaactacaa
agtcaagctgaggaaaacaagaggaagaacaaagagagagccctgaaagcacgagaaaat
caacaaatctccatggagcctcaggccaacccaaaagataaagaaaaaggagaaagcaaa
tccaagaaagatggtcagcaggaaggaaagcccagtgtcacaaatggaggagctcctcca
ccacgtatcacagtgtcttag
DBGET
integrated database retrieval system
