KEGG   Anolis carolinensis (green anole): 100562552
Entry
100562552         CDS       T01608                                 
Symbol
bcas2
Name
(RefSeq) BCAS2, pre-mRNA processing factor
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100562552 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acs03041]
    100562552 (bcas2)
   03400 DNA repair and recombination proteins [BR:acs03400]
    100562552 (bcas2)
Spliceosome [BR:acs03041]
 Complex B
  Other components
   Prp19 complex
    100562552 (bcas2)
 Complex C
   Prp19-CDC5 complex
    100562552 (bcas2)
DNA repair and recombination proteins [BR:acs03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100562552 (bcas2)
SSDB
Motif
Pfam: BCAS2 EzrA HAUS2 FmiP_Thoc5 THOC7 Tup_N CCDC113_CCDC96_CC TMCO5 OmpH GAS Filament DUF3450 SCRG1 Relaxase_C Uso1_p115_C
Other DBs
NCBI-GeneID: 100562552
NCBI-ProteinID: XP_003220516
Ensembl: ENSACAG00000002720
LinkDB
Position
4:complement(130264698..130275933)
AA seq 225 aa
MSGPGLVAGEVAVDALPYFDQGYEAAGVREAAGALVEEETRRYRPTKNYLSYLPAPDYGA
FETEIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGCNAWKVYNEHLVHMIEQAQKELQSLRKHIQDLNWQRKNMQLTAGAKLRE
MESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtcggggccgggcctggtggcaggcgaggtggccgtcgatgcgctgccttacttcgac
caaggctacgaggcggccggcgtacgggaggcggccggggcgctggtcgaggaggagacg
cggcggtacaggcccaccaagaactacctcagctacctaccggcgccggactacggcgct
ttcgagactgaaataatgcggaatgagtttgagcgtcttgcagcccgacaacccatagaa
ctgctgagtatgaagaggtatgagctgcctgcaccctcttctgggcagaagaatgacatc
acagcatggcaagaatgtgttaataactcaatggctcagctggaacaccaggcagttcga
attgagaatttggagttgatgtctcagtatggctgcaatgcttggaaagtatataatgag
catttagttcatatgattgaacaggcacagaaagagttacagagtttgagaaaacacatt
caggaccttaactggcaacggaagaacatgcagctcacagcaggtgctaaacttcgggag
atggaatcaacttgggtgtctcttgtcagtaaaaactatgagattgaacgaactattgtg
cagctggaaaatgaaatttctcaaattaagcagcaacatggggaagccaacaaagaaaac
atccaacaggacttctga

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