KEGG   Anolis carolinensis (green anole): 100562628
Entry
100562628         CDS       T01608                                 
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03030  DNA replication
acs03410  Base excision repair
acs03420  Nucleotide excision repair
acs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100562628 (rfc5)
   03410 Base excision repair
    100562628 (rfc5)
   03420 Nucleotide excision repair
    100562628 (rfc5)
   03430 Mismatch repair
    100562628 (rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acs03032]
    100562628 (rfc5)
   03036 Chromosome and associated proteins [BR:acs03036]
    100562628 (rfc5)
   03400 DNA repair and recombination proteins [BR:acs03400]
    100562628 (rfc5)
DNA replication proteins [BR:acs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100562628 (rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100562628 (rfc5)
Chromosome and associated proteins [BR:acs03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100562628 (rfc5)
DNA repair and recombination proteins [BR:acs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100562628 (rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100562628 (rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_11 AAA_22 AAA_assoc_2 AAA_16 RuvB_N ResIII AAA_24 AAA_14 DEAD PhoH DUF815 AAA_7 AAA_19 AAA_5 AAA_30 TIP49 Thioredoxin_6 ATPase_2 Mg_chelatase DNAX_ATPase_lid RNA_helicase
Other DBs
NCBI-GeneID: 100562628
NCBI-ProteinID: XP_003222833
Ensembl: ENSACAG00000016614
UniProt: H9GNG0
LinkDB
Position
b:2703508..2716777
AA seq 342 aa
MESAAEMEGPSERTVAVKSANLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLF
YGPPGTGKTSTILACAKQLYKDKEFNSMVLELNASDDRGIGIVRGPILSFASTRTIFKKG
FKLVILDEADAMTQEAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT
PELMVPRLKHVIESEKVDVSDDGMKALVTLSNGDMRRSLNILQSTNMAFGKVTEETVYTC
TGQPLKSDIANILDWMLNQDFTAAYHNIMELKTLKGLALHDILTEIHLFVHRVDFPPSVR
IQLLIKMADIEHRLAAGTSEKIQLGALVGAFQVTRDLIAAEA
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggaaagcgccgccgagatggagggcccctcggagaggacggtggccgtgaagagcgcg
aacctgccttgggtggaaaaataccggcctcagacgttaaatgatctgatttctcatcag
gacattctgagcaccattcagaagttcatcagcgaagatcggttacctcatcttctcttc
tatgggcctccggggactggcaagacttccaccattttggcttgtgctaaacaactttac
aaagacaaggaattcaactccatggttctagagctgaatgcttcagatgaccgaggcatc
ggcattgtcagaggacctatcctgagctttgccagcacaaggaccatctttaagaaaggc
tttaaactggtgattctggatgaagcagatgccatgacgcaggaagcacagaatgctctc
aggcgggtaatagaaaaattcaccgaaaatacccggttttgcctgatctgcaactatctc
tccaagatcatcccggccttacagtctaggtgcaccagattccgcttcggtcctttgaca
ccagagcttatggttccccggttgaagcatgtcattgagagtgagaaagttgatgtaagt
gatgatggaatgaaggcactggtgacgctgtcaaacggtgacatgcgccggtctctgaac
attttacagagcacaaacatggcctttggaaaggtgactgaggagacagtctacacctgc
accgggcagccactcaagtcggacattgctaacatcctcgactggatgctgaaccaagat
ttcactgctgcctatcacaatattatggagctgaagacattgaagggcttggcactgcat
gatattctgacagaaatccacctgtttgtccaccgagttgacttcccaccatctgttcga
atccagttgctgatcaagatggcagatattgagcatcgcctagctgcggggacaagtgag
aagatccagctgggggctcttgtgggtgctttccaggtcaccagagacctcattgcagca
gaagcgtaa

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