Anolis carolinensis (green anole): 100563125
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Entry
100563125 CDS
T01608
Symbol
bard1
Name
(RefSeq) BRCA1 associated RING domain 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100563125 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100563125 (bard1)
04121 Ubiquitin system [BR:
acs04121
]
100563125 (bard1)
03036 Chromosome and associated proteins [BR:
acs03036
]
100563125 (bard1)
03400 DNA repair and recombination proteins [BR:
acs03400
]
100563125 (bard1)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100563125 (bard1)
Ubiquitin system [BR:
acs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100563125 (bard1)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100563125 (bard1)
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100563125 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-RING_10
zf-C3HC4_2
ANK_LRRK2
zf-C3HC4
zf-C3HC4_4
NIBRIN_BRCT_II
Prok-RING_4
Ank_KRIT1
zf-C3H2C3
DUF1272
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
100563125
NCBI-ProteinID:
XP_008111738
Ensembl:
ENSACAG00000015438
UniProt:
G1KR46
LinkDB
All DBs
Position
1:complement(116419315..116492393)
Genome browser
AA seq
769 aa
AA seq
DB search
MRPSALRVRSGNQACSSFSFSSPARMEQPWKETRAALGRLRESLGCSRCGGILKKPVNIG
SCEHIFCLTCVGDSIGTACPVCHMPAMVQDMKVNRQLDNIIKLYSKLQNLQGPDFSDSRD
ILSTPEEIPSVPGTKKEIKMWFSPRSRKMRFTLARKPQKSETVMEKASQPHALTSTYDFI
SSPSSQETFREVKKRQPKKKKQRKKTLDDVNEQWGLLGGRKKDSSSETRETLVSFCSQSM
VIPSPDSKGTSEQRPVMVESEGELGLSVSTSVITTPKRDKNKSSGLNDLTEECLASKECL
SSGNSANKRDRQLVGSPTPLPKRHRKKEQNVSGRSLSLKELQGPSPQNLSGNTSPTFDSV
MSSQLSVNLRNTEDFQRASSETFPRTPLKFNNVAQKGTQQTEPLCKKSPSNSSLKRNHKG
ETLLHVASIEGDLSSVEHLLKNGADPNVKDYAGWTPLHEACNHGHQDIVALLLQHGALLN
ATGYQNDLPLHDAVKNGHLSIVKLLLSHGASPDTVNIFGHRPVDYAETEEMKSVLILSAK
NECSVTQSGEQINRNHPREGPVVLLGSGLDPAKRQLLSKLALVLKGSVCMEFNSTVTHVV
IPDHPVRSTMKCMLAILNGCWILAFKWVEVCLQTGAREEEETYEIDGGPRQSRLNKEQLL
PKLFDGCYFYFLGVFKEHNKDDLKELVKAGGGQILLRKPKSDNDVTQTINTVAYHAEITS
DQSFCTQYIIYDGSSNYTPEKIRQGKVWEVPSKWLIECVMSFQLLPVKQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgtcggcgctccgggtccgctccgggaaccaggcctgctcttccttctccttc
tcctcccccgcgcgcatggagcagccctggaaggagacccgggcggcgctggggaggctc
cgcgagagcctgggctgctcccgatgtggtggcattctgaagaagcctgtgaacataggg
agctgtgaacatatcttctgcctgacatgtgtgggcgacagcattggcacagcctgtcca
gtgtgtcacatgccagccatggtacaagatatgaaggtaaacaggcagctggacaatatc
atcaaactatacagcaaactgcagaatctgcagggccctgacttttcagattctagagat
attttgtctaccccagaagagattcctagtgtgccaggaacaaagaaggagatcaaaatg
tggttcagtcctcgtagtaggaagatgagatttactttggcgaggaagccgcagaaatct
gagacagtcatggaaaaggctagccaaccccatgccttgacttccacatacgatttcatt
tcctccccttcttctcaagagactttcagagaggttaagaaacgtcaaccaaaaaagaag
aagcagaggaaaaagactttagacgatgtcaatgaacagtgggggctgcttgggggaaga
aagaaggacagctcaagtgaaaccagggaaaccttagtgtcattttgtagtcaaagtatg
gttattccgagtccagattctaaaggcacatctgagcaaagacctgtaatggttgagagt
gaaggtgaacttggccttagtgttagtacatctgtgataactacaccaaagagggacaaa
aataagtcatctggtctgaatgatttgactgaagagtgcttggcttcaaaggagtgcctc
tcttctggaaacagtgcaaataaacgtgacagacaactggtgggatctcctactccttta
cctaaacgtcacagaaagaaggagcagaatgtctctgggagatcactttcattgaaagag
ttgcaagggccgtcacctcaaaatctcagtggcaacacctctcccacttttgattctgta
atgtcttctcaactgagtgtcaatttgagaaacactgaagattttcaacgtgcaagtagt
gaaacatttccaagaacaccactgaagttcaataatgttgctcaaaaagggacacagcaa
acagagcctttatgcaagaaatctcctagtaactcgtctttgaaaagaaatcataaaggg
gaaacactactccatgttgcttccattgagggggatctttcttctgttgagcatttacta
aaaaatggagcagaccccaatgttaaagactatgcaggatggacaccactgcatgaagct
tgtaatcatggacatcaggacatagtggcattactgttgcagcacggggcactcctgaat
gcgaccggttatcagaatgatttgcctcttcacgatgcagtcaagaatggacatcttagc
attgttaaactattactttctcatggtgcttctccagatacagtgaatatatttggacac
agacctgttgattatgctgaaacagaagaaatgaagtcggttctaatattgtcagcaaag
aatgaatgttcagttactcaatctggagagcaaataaaccgaaatcatccgagagagggg
cctgttgttctcctcggaagtggtcttgatccagctaagcgacaattgctcagcaaatta
gcactggttctgaagggtagtgtctgcatggagtttaacagcacagtgacacacgtggtt
atccctgaccatccggtgcggagtactatgaagtgtatgctggcaattctgaatggatgc
tggatcttggcatttaagtgggtagaggtctgcctccagacaggagccagggaagaagaa
gagacatatgaaatagacggaggcccacgacagagtcggctgaacaaagagcagttgttg
ccaaaattgtttgatggctgctacttctatttccttggagtgtttaaggagcacaacaaa
gatgacctgaaagaactggtgaaagcaggtggaggacagattctcttgaggaaacccaaa
tcagataatgatgtgacacagacaatcaataccgtggcctatcatgctgagattacttct
gaccaaagtttctgtacccagtatataatctatgatggttcatctaactataccccagag
aaaattcgtcaaggaaaggtctgggaggtgccatctaaatggcttatagagtgtgtgatg
tcatttcaactgttacctgttaagcaatga
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