Anolis carolinensis (green anole): 100563152
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Entry
100563152 CDS
T01608
Symbol
limch1
Name
(RefSeq) LIM and calponin homology domains 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acs04990
]
100563152 (limch1)
Domain-containing proteins not elsewhere classified [BR:
acs04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
100563152 (limch1)
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
DUF4757
CH
LIM
Big_1
Motif
Other DBs
NCBI-GeneID:
100563152
NCBI-ProteinID:
XP_008109848
Ensembl:
ENSACAG00000012067
UniProt:
A0A803SKM0
LinkDB
All DBs
Position
5:100620456..100897563
Genome browser
AA seq
1767 aa
AA seq
DB search
MASPPVVDLAEDAPRPEPALAEAQQWIEQVTGRTFGDKDFRLGLENGVLLCELLNSIKPG
LVKKINRLPTPIAGLDNIALFLRGCKELGLKESQLFDPGDLQDTSNRAAVKNHECTRKLK
NVLVTIYWLGKAANSSTYFSGATLNLKEFEGLLTQMKKDTEDVESPKRSIRDSGYVDCWD
SERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLPHRKLPD
VKKDDMSARRTSYGEPKSVVPFNQYLPNKNNQTAYIPAPLRKKKAEREEFRKSWSTATSP
LGERPFSKTHPETIEEEQSEVLAQSEEDLGCTISTAVRPVEPFQADISQQDPLRQSPTHS
ANKTAGPRNNEKDPEELKKLRRLEEAGIKIMPAAQRYGSSQKHISEKSELTPDIILRKEN
PFMLCYQQKDSGSEDERDEKIPDIEKDDFAIRKARLNQPKLTLPFNHYFLGSCTKKERGK
VEEGKKQSEKEDNSSGKKVHMISTRPATLCEAKPALPSRDDGSKEKNQAKLPDIQRDGLA
RRKTQANPSQLDLSVFVKAPITQADKAIWDRLKVSGNTSDEELTDTPGSLLSSEMTVETS
HNSFASPKVQTCKKTTCPKQRFVHFGPVTEIDHQQWEQPSVTRAVPKNEIEETTNRKNIE
ALEVSSGTSSSVSVSPEKSIAHADEGHKPHAISSEILLSEMDMHNSSVPDVCDNPEKQIP
SSSLSEWNESSEEELDETFPDIERDDMLARRFGTFQKSTSPVRTSCSPISVVSSHHPLKQ
EQNVILCRQWKTPQKVERTLTGMMQCEHRVPSPASPSSDVLCENGYGKSNDQDDHRNPTA
GEKGALKNTGKDDMMVRRTRAFLKQTGPCVKQFLPVPFSKQQNGEEATKELVKTEQKMKS
ITVTDSVVTENHPRPCMEIPERLVVHPEQQLEEEKSSTSSAKENVSSDAHKNVLDLDSVK
TEHSSEMQEALETNSKELMSLEDESIQIFGSRTPVSDDAESVSMFDMRCVDEATVMQPHS
KARHEKLQTIHNQLKEDEDRWQDDLARWKSRRRSASQDLLKKEAERKKMERLLTGAEGPS
ERRKSIKTYREIVEEKERREKELHEAYKNARSREEADHILQQYIERFTISEAVLERLEMP
KILERSHSAEPNSSSPPKDPNPLRYLRQQSLPAPKYTAKVEATIVPSGSEASISTGRTSP
SKPFPSKAVPMLTPKPYSQPKNTQQVFRTFKVDGKVSMNGEAVNGMEEERERECTALIFA
PSPSRSPKSDYVVEVDGISTEGKQDATNPELVLKRLIEHNKHREQALLSGRRLREEMSPL
KSIVCEDSLTEDQPTNQINEFDSERPPPASNHKEFSAAVSCASPIVTSVKYSSLSNHSKE
MTSVGGLKKLETSPQKEAPLLQKVETSGAPEQDGGLVFPLLKKIPEMNQVVLQNSALQAD
SDNRDKLNRLGCWSWNPEEERKRQERWQHEQERVLQERYQKEQDKLKEEWEKAQKEVEEE
ERKYYEEERKIIEDTVVPFTVTSNSAEHLSTSSSVTDGNGTLNMVDMSNSEEEHKPKDRT
PKKLFCEQDGTYFSKSKEHEPLKENLSTVNEVCVDTNQRRSEQENQRSMSECTPPTKMTL
PLYQDTPRNQTKQSPRVSDVKQKNSLLEHNLGPPVNSAKEIRRAGCRESSRTGPTSPGSP
TMQSQSPNRSISGKKLCSSCGQPLGKGAAMIIESLGLYFHIQCFRCGICKGQLGDAASGT
DVRIRNGLLNCNDCYIRSRSAGQPTTL
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccgccggttgtagacctggccgaggacgccccccgcccggagccagccttg
gccgaagctcagcaatggatcgagcaagtaacaggaagaacattcggtgataaagatttc
cggttggggctggaaaatggtgttctgctgtgtgagttgctgaattccataaagcctgga
ttggtcaagaagatcaatagattgccgactcctattgcaggactggacaatattgccttg
ttcttaagaggctgcaaggaactggggctgaaggagtctcagctttttgacccaggagac
ctgcaggacacctcaaacagagcagcagtcaagaatcatgaatgtactaggaagctgaaa
aacgttttagtcaccatctattggctgggaaaagcagcaaacagcagcacttacttcagt
ggagcaacgctgaacctgaaggagtttgaaggattattaacccagatgaaaaaggatact
gaggatgttgagagccccaagcgcagtatccgtgacagtggctatgtagactgttgggac
tcagaacggagcgactctctttctcctccacgccacggcagagatgattcctttgatagc
cttgattcctttggctctcgctcccagcagacgccgtctccagatgtggtgttaagagga
agcagcgatgggagaggaagtgattcagaatctgatttgccacatcgaaagttgccagat
gtaaaaaaagacgatatgtcagcaaggcggacatcctacggtgaacccaaatcagttgtg
ccttttaaccaatacctccccaataaaaataaccagactgcctatattccggctcctctc
aggaagaagaaagcggaacgtgaggagttcaggaaaagctggagtactgctacttcacct
ctaggagagagacctttcagcaaaacccaccctgaaaccatagaagaagagcaaagcgag
gtactggcacaatctgaagaggatctgggctgcaccatttccactgccgttcgtccggtg
gagccatttcaggcagacataagccaacaagaccccttacgtcaatctcctacacattct
gcaaacaaaacagcagggccaagaaataacgaaaaagatcccgaggagctcaaaaaacta
agaaggcttgaagaggctggtattaaaatcatgccagcggcacagcgctatggcagcagt
caaaagcacatctctgaaaagagtgagcttactccagacatcatccttcgcaaagaaaac
ccctttatgctgtgctatcagcaaaaggattctggctcagaagatgaacgagatgagaaa
attcctgacatagagaaagatgactttgcgatacgcaaggcaagattaaaccaacccaaa
cttacactgccatttaaccattactttctgggatcctgtacaaaaaaagagcgaggtaaa
gtggaagaagggaagaaacaaagcgaaaaagaggacaattcaagtggaaagaaggtacat
atgatttcgacaaggccagcaacattatgtgaagccaagccggcactgccatctcgggat
gatggatctaaggagaaaaaccaagccaaacttcctgacattcagagagatggtctggct
aggcgaaaaactcaggctaacccctcccaactagacttgtcagtttttgtgaaagctcct
ataacacaagcagataaagcaatctgggatcgactaaaagtttcagggaataccagtgat
gaggagctcacagacactccaggttcactgctgtcttctgaaatgacagtggaaaccagt
cataacagttttgccagccctaaagtgcaaacgtgcaagaaaactacctgccccaaacag
agatttgtgcactttgggccagtgacagaaattgaccatcagcaatgggagcagccttca
gttactagagctgtgcccaaaaacgaaatagaagagacaactaataggaaaaatattgag
gctcttgaggtatcaagtggaacttcctcctcagtttctgtgagccccgagaaatccatt
gctcatgctgatgaagggcacaagccacatgctatttccagtgaaatactattatctgaa
atggatatgcataattcatctgttccggatgtttgtgataatcctgagaagcagatacct
agcagcagcttgagtgaatggaatgaaagcagcgaagaggaattggatgaaacgttccca
gatattgaaagagatgacatgctggctagaagatttggaacttttcagaaatctactagc
ccagttcgcacatcttgctctcccatttcagtagtcagtagtcatcatccattgaaacag
gaacaaaatgttattctgtgcagacagtggaagactccacagaaagtagaaagaacactg
actggcatgatgcagtgtgaacacagagtgccttcacctgcatctccaagttcagatgta
ttgtgtgaaaatggctatggaaagtcaaatgatcaagatgatcacagaaaccctacagca
ggagagaaaggggcacttaaaaatacagggaaagatgacatgatggtgagaagaaccaga
gcttttctgaagcagactggaccctgtgttaaacagtttctcccagttcctttctcaaag
caacagaacggcgaggaagcaactaaggagcttgtaaagactgaacagaaaatgaagagt
attactgtgacggattcagtggtcactgaaaaccatccaaggccttgcatggaaatccca
gaaaggcttgtagtgcatcccgaacagcagctggaagaagagaaatctagcacctctagt
gcaaaagagaatgtctcttctgatgcacataagaatgtgcttgaccttgactcagtcaaa
accgaacattcttctgagatgcaggaagctcttgaaacaaacagcaaagaacttatgtcg
ctagaagatgaatcaatacaaatattcggctcaagaactcctgtgtctgatgacgcagag
agtgtgagcatgtttgacatgagatgtgtggatgaggctactgtaatgcagccccacagc
aaagcacgccatgagaagctgcagactattcataaccagctgaaggaggacgaagatcgg
tggcaggatgatttagcccggtggaagagtcggcggagaagtgcttcacaggatttactg
aaaaaagaagctgaaaggaaaaagatggaacgcttactgaccggagctgagggacccagt
gagcgaaggaaaagcatcaagacttatagagaaatagtagaagagaaagagcggcgagag
aaagaactacacgaagcatacaagaatgccaggtcacgagaggaggcagatcatattctc
caacaatacattgagagattcaccattagtgaagctgtccttgaacgcttggagatgcca
aaaattctggagagaagccattcagctgagccaaattcatcatccccgcctaaggaccca
aacccgctgcgatatttacggcaacagtcacttcctgcccccaaatacactgccaaggtt
gaggcaaccattgttcccagtggatcagaagccagcatttcaacaggtcgcacttctcca
agcaaaccttttccctccaaggctgtgcctatgttgacacccaagccttactcacagcct
aaaaacacccagcaggttttcagaacatttaaggtagatggaaaagtcagcatgaatgga
gaagccgtcaatggaatggaggaggagcgagagagggaatgcacagcgttaatttttgct
ccttcaccaagtcgctcgccaaaatccgactatgtggtggaagtggatggcatctcaacg
gaggggaagcaagatgccacgaatcctgagcttgttctgaagagactcattgagcacaat
aagcacagagagcaggccttgttgtctggcagaagattacgtgaagaaatgagcccctta
aaaagcattgtatgtgaggattccctgactgaagatcaaccaaccaaccaaataaatgaa
ttcgattcagaaagaccgcctccagcttcaaaccacaaagaattcagtgcagcagtttcc
tgtgccagccctatagtgaccagtgtgaagtactcctccctcagtaatcattccaaggaa
atgacttcagttggtggcctgaagaaacttgaaacatcaccacagaaggaagcaccactt
ctacagaaggtagagacttcgggggctcctgagcaagatggaggtttagtctttccactt
ctgaagaagatccctgagatgaatcaagttgttttgcagaattctgccctacaagctgac
agtgataaccgtgacaagttgaatcgtcttggctgctggtcttggaatccagaagaggag
cgtaagcgacaggagcgatggcagcatgaacaggagcgcgtactccaggaaaggtatcag
aaggagcaggacaagctgaaagaagaatgggaaaaagcacaaaaagaagttgaagaggag
gaacgtaaatactatgaggaggaacgcaagatcattgaggataccgtggttccattcaca
gttacttcgaattctgcagaacacttgtccacctcttcctctgtgacagatggaaatggg
actctgaatatggtagatatgagtaactctgaagaggaacacaagccaaaagacagaact
ccgaagaaactattttgtgaacaagatggcacttatttctcaaaaagcaaggaacatgaa
ccactgaaggagaatttgagcactgtaaatgaagtctgtgtagacactaatcagagaaga
agtgaacaagaaaaccagaggtccatgtcagaatgtacaccgcccaccaaaatgactttg
ccattatatcaggatacaccacggaatcagacaaaacaaagcccacgtgtttcagatgtc
aagcagaaaaattcactattggaacataatttaggtcctccagtcaattccgcaaaagaa
attcggagggctggctgtcgagagagctctagaactgggccaacatcaccaggttctcct
acaatgcaaagccaatcacccaacaggtctatcagtggcaagaagctctgctccagctgt
gggcaacctcttgggaaaggcgctgccatgattatcgaatcacttggtctttacttccat
attcagtgcttcaggtgtggaatctgtaagggacagcttggagatgcagcgagtggaaca
gatgtccgaattagaaatggtcttctcaactgcaatgattgttacatccgatccagaagt
gctggtcagccaacaactttgtga
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integrated database retrieval system
