Anolis carolinensis (green anole): 100563909
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Entry
100563909 CDS
T01608
Symbol
cdc40
Name
(RefSeq) cell division cycle 40
KO
K12816
pre-mRNA-processing factor 17
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100563909 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100563909 (cdc40)
Spliceosome [BR:
acs03041
]
Complex C
Other components
Step II factors
100563909 (cdc40)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
100563909
NCBI-ProteinID:
XP_008119262
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Position
1:191513515..191614637
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AA seq
580 aa
AA seq
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MSAAIAALASYGGSDSDSDSGSDAEGRPNPPTRVAGGDAVLHLASSASQALLPAVDSAPA
VAVKEDVETGLHLDPATKEVQYNPSYDTMFAPEFGPVNPFRTQQMAAPRNMLSGYTEPAH
INDFMFEQQRRTFATYGYALDPSIDNYEVSTKYIGSIEEAEKNQGLTVFETGQKKMEKRK
KFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQRELDEITAKRQKKGKHEDDKPGEEKT
ILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPL
SGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGNQFLSAAYDRYLKLW
DTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDVRSGEIVQEYDRHLG
AVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQ
SMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKT
TKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccatcgctgcgctcgcttcatatggtggctccgactcggactctgactcc
ggctccgacgctgagggtaggcccaaccctccgacgcgggttgccggcggggatgcggtg
ctgcacctggcctcctcggcctctcaggcgcttctgcccgcggtggactcggccccggcc
gtggcagtgaaggaagatgtggaaacaggacttcaccttgatcctgctaccaaggaagta
cagtataacccatcttatgatactatgtttgctccagagtttgggccagtgaatccattt
aggactcagcagatggctgcccctaggaatatgctttctggatacacagaaccagcacac
atcaatgatttcatgtttgaacaacagagaaggacatttgcaacttatggatatgctttg
gatccctcaatagataattatgaagtttccactaaatatattggatctattgaggaagct
gaaaaaaatcaaggtttgacagtgtttgaaacaggacaaaagaaaatggagaaaaggaag
aaattcaaagagaacgatgcctctaatattgatggtttcttgggaccatgggcaaaatat
gttgatgaaaaggatgttgcaaagccctcagaagaagaacaaagagaattggatgaaata
acagcaaagaggcaaaagaaaggcaaacatgaagatgataagcctggagaagaaaagact
attttgcatgtcaaagagatgtatgactatcaaggaaggtcctatcttcatgttccccag
gatgttggagttaacctccgttcaacagtaccccctgaaaagtgttaccttcctaaaaag
caaatccatgtatggtctggtcataccaagggagtcagtgctgtcaggctatttcctctt
tctggccacctattgttgtcctgctccatggactgtaaaattaagctctgggaggtgtat
ggtgaacgaagatgcttacgaactttcattggacacagcaaagctgtgagagatatctgt
tttaacaatgctgggaaccagtttctcagtgctgcgtatgaccggtatcttaaactctgg
gacactgaaacaggtcagtgtatttcaagattcactaacagaaaagtcccttactgtgtc
aaattcaatcctgatgaagataagcagaatctttttgtagcagggatgtctgataagaaa
attgtacagtgggatgttcgaagtggtgaaatcgttcaggagtatgacaggcacttgggt
gctgtcaacactattgtatttgtggatgagaacaggcggtttgtgagcacatcagatgac
aagagtttgagagtctgggaatgggacattccagtagatttcaaatacatagcagagcca
agtatgcactcgatgcctgcagtgactttgtccccaaatggaaagtggttggcttgtcag
tccatggataatcagattttgatttttggagcacaaaacagattcaggttgaataaaaag
aaaatcttcaaaggtcatatggtggctggttatgcttgtcaagtagatttttcacctgac
atgagttacgtgatatctggtgatgcagatggaaagctgaacatctgggactggaaaact
actaagttgtatagtagattgaaagcccatgacaaagtctgtataggtgcagtatggcac
ccacatgaaacatccaaggtgatcacatgtggatgggatggtctcattaaactctgggac
tga
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