Anolis carolinensis (green anole): 100564102
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Entry
100564102 CDS
T01608
Symbol
patl1
Name
(RefSeq) PAT1 homolog 1, processing body mRNA decay factor
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100564102 (patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100564102 (patl1)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100564102 (patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
100564102 (patl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
100564102
NCBI-ProteinID:
XP_008108913
Ensembl:
ENSACAG00000006607
UniProt:
G1KFK1
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All DBs
Position
1:90967637..90995910
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AA seq
765 aa
AA seq
DB search
MFRYQSLEDCPLDEDDEAYHNLAEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAEMEEKP
ASAGEQVERGVTDEMDLLGDHEENLAERLSKMVIDNELEDPAIMQAVQTRPLVQHSTGLN
SSIWDGPSVLRRIRGPLLNQEVPSVSVLEYALPQRPPQAQEEEQDVSERALPRRSSSPVI
GSPPVRAVPIGTPPKQPSMPNFNQQILCPKPVHIRVPIQQRYPSPFSERMSPNQLCNVTN
SSLLGHPFPPSVTPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVSSPLASMNPKLLQGR
VGQMIPPASGFRAFFGAPPAPSQHHSPCPGAHLQNLRPQPQMFRPDTTHLHPQHRRLLHQ
RQQQNRSQHRNLNGSVGDRGNHRNNHQEQIRKDPYANLMLQREKDWVSKIQMMQLQSTDP
YLDDFYYQNYFQKLEKLSAAEDMHGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLT
VSSVNNPRKMIDAVVTLRGEEDETKEKQVRDKRRQTLVMIEKTYSLLLDVEDYERRYLLS
LEGDRLALMEERKQKICDMYDNLRGKTSNQESKLSDDPFVQIMCIRKGKRLVGRILPFLS
TEQAANVLMATARNLPFLIKKDAQDEVLPCLLRPFSLVLYHLPLGTVACILQQLMNLPQS
TTAAPSANQHLTAVLQNKFGLSLLYLVLSRGEELQNSDSNTEHMQDNQWADLMFMATREL
LRIPQAALAKPVTPPSNLLSLFSRYVDRQKLNVLETKLQLIQGIR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctatcagtctctggaggactgccctttagatgaggatgatgaagcctatcat
aacttggctgaggaagatgaagatattgaccagttcaatgatgacacctttggagctggt
gcagttgatgatgattggcaggaagcccatgaaaggctggcagagatggaggaaaagcct
gcatctgcaggagaacaagtggaacggggagtcactgacgagatggacctactgggggac
catgaagagaacctggcagagaggttgagtaaaatggtgattgataatgagctagaagac
ccagccatcatgcaggctgtgcaaacccgacctctggtacagcactcaactggccttaat
tcaagcatctgggatggtccttcagtactcaggcgaattagagggccacttctcaatcag
gaggttccctctgtgtcagtactagaatatgccctcccacagaggcctccccaagcccag
gaagaggagcaggatgtttcggagcgggcgttgccaaggcggtcatcctcaccagtcatt
ggcagtcctcctgtgagggctgttcccattgggaccccaccaaagcagcccagcatgccc
aactttaaccagcagatcttatgtccaaagcctgttcacatcagagtcccaattcagcaa
cgttatccaagtccctttagtgaaaggatgtctccaaaccagctctgcaatgtgacgaat
tcctccctcctgggacacccatttcctcccagtgttactcctgttctcacccacctccaa
agagcacagctgctaggaggagcacaggctggtaggatgtctcccagtcagtttgcacgg
gtgtctggccttgttagcagccctcttgcatctatgaaccctaaactcctccaaggcaga
gttgggcagatgatacccccagccagcggattccgtgccttctttggggcaccacctgca
ccatcacaacatcactccccgtgtcctggagctcatttgcagaacctaaggcctcagcca
cagatgttcaggccagatacaactcaccttcacccacagcaccgacgactcttacatcag
aggcagcagcaaaacaggagtcagcaccggaatctaaatggatcggttggggaccgaggg
aatcatcgaaataaccaccaggaacaaatcagaaaggatccatatgccaatctcatgctc
cagcgggaaaaggactgggtatcaaagatccagatgatgcaactgcagagcactgatccc
tacttggatgacttctattatcagaactattttcagaagctggaaaaattatctgcggct
gaggatatgcatggtgatggtcctaagaaagaacgcactaagctgatcaccccacaagtt
gcaaagttagagcatgcctataagccagtgcagtttgaaggctcactagggaagctgaca
gtctccagtgtgaacaatccccggaaaatgattgatgctgttgtgacgctgcgaggtgaa
gaagacgagacaaaagagaaacaggttcgagataaaaggcgtcagactcttgtcatgatt
gagaagacatacagcctactcctggatgtagaagactatgagaggcgctacctcttgagc
ctggaaggggataggctagccttgatggaggagaggaagcaaaagatctgtgatatgtat
gacaatctaagagggaaaacatccaaccaggaaagcaagctgagcgatgacccttttgtg
cagattatgtgcatccggaaaggaaagcgtctggttggccggattctgcccttcttgtcc
actgaacaagctgccaacgttctcatggcaacagccaggaacctgcccttcctaatcaag
aaggatgcccaggatgaggttctcccttgtttgctgaggcccttctcccttgttctctac
catctacccctgggaactgtggcctgcatcctgcagcagctcatgaacctacctcagagc
acaacagcagctccatctgccaaccaacacctcacagctgtgctccagaacaagtttggc
ctctctcttctgtatttggtcttgagccgaggagaagaactgcaaaattcagactctaat
acagagcacatgcaagacaaccagtgggcggatctgatgttcatggcaacccgggagctt
ctccggatcccgcaggcagccttggcaaagccagtgactcccccttctaatctcttatca
ctcttctctcgctatgttgatcggcagaagctgaatgtgctagaaacaaagttgcagttg
attcaaggaatacggtag
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