Anolis carolinensis (green anole): 100564303
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Entry
100564303 CDS
T01608
Symbol
cpsf3
Name
(RefSeq) cleavage and polyadenylation specific factor 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100564303 (cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acs03021
]
100564303 (cpsf3)
03019 Messenger RNA biogenesis [BR:
acs03019
]
100564303 (cpsf3)
Transcription machinery [BR:
acs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100564303 (cpsf3)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100564303 (cpsf3)
U7-dependent histone pre-mRNA processing factors
100564303 (cpsf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100564303
NCBI-ProteinID:
XP_008115862
Ensembl:
ENSACAG00000001759
LinkDB
All DBs
Position
1:complement(148476176..>148492463)
Genome browser
AA seq
692 aa
AA seq
DB search
MAVRRRAEAFVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRVSGILVKRNFNYHILSPCDLSSYTDLAMSTVTQTQAIPYTGSFSLLHYQLQKL
TGDIKEIEVQEKSALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEIQSNPKI
HKAVIHKIPKKEEIEAYHKKMEIMLQDIFGEDCVSAKKDNILSITVDGKTANLSLDTRTV
DHEPGCEDDDETLREMVELAAQRLYDAITPLQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaggcggcgggcggaggccttcgtgccggcggaggagagcgaccagctcctg
atccgtcccctaggtgctggacaagaagtagggagatcatgcattatcttagaattcaaa
ggaaggaagataatgctcgattgtggaattcaccctggcctcgaaggaatggatgcactt
ccttacattgatctgatagatcctgctgagattgatctcctcttgattagtcatttccat
ttagatcactgtggggcactgccctggtttctacaaaagacaagtttcaaaggaagaacc
tttatgacccatgctacgaaagcaatttatagatggcttctatcagattacgttaaagtt
agtaacatctccgcagatgacatgctgtatacagagacagatttggaagaaagcatggat
aaaattgagacaatcaacttccatgaagtaaaagaagtggcagggatcaagttctggtgt
taccacgcaggccatgttttgggagcagctatgtttatgattgaaatcgctggagtgaag
cttttatatacaggtgatttctcaagacaagaagacaggcatttgatggcagctgagatt
cctaatattaaacctgacattcttatcattgaatccacctatggtacacacatccatgag
aaacgggaagagagagaggcacgattctgtaacactgtgcatgatattgtaaacagagga
ggcagaggtcttattcctgtatttgccttgggaagagctcaagaattgcttttgatatta
gatgaatactggcaaaatcaccctgagctacatgaaataccaatctactacgcctcctct
ctggcaaagaagtgtatggccgtgtaccagacatatgtcaatgccatgaatgataaaatc
cgcaagcaaatcaacatcaacaacccatttgtattcaagcacattagtaatctgaagagt
atggatcattttgatgacattggccccagtgttgtaatggcttcccctgggatgatgcag
agtggtttatccagagaactgtttgaaagctggtgcactgacaagagaaatggggtcatc
atagctggatattgtgtggaaggaacacttgccaagcacattatgtctgaaccagaagaa
attacaactatgtctgggcagaagctcccactgaagatgtctgtggactacatttctttc
tctgctcatacagattaccagcaaaccagcgagtttattcgggcattaaaacctccacat
gtgattctggtgcatggtgagcagaacgaaatggccaggttgaaagccgcgctgatacgt
gaatatgaggataatgatgaagttcatatagaggtccataatcctagaaataccgaggct
gtgacattaaacttcagaggagaaaagctggccaaggttatgggttctctagcagataag
aaaccagaacaagggcaaagagtttcaggaatacttgttaaaagaaattttaactatcac
atactttctccgtgtgacctttccagttacacagatcttgccatgagcactgtgacacag
acgcaagctatcccatatacaggctcattcagtctgcttcattaccagctacaaaaatta
acaggtgacataaaagaaatagaagttcaggaaaaatcagctctgaaagtttttaaaaac
atcactgtaatccaggagcctggcatggtggtgcttgagtgggtagcaaatcctgctaac
gatatgtatgcagacaccgtaactacagtgatactggaaatacaatcaaatcccaaaatt
cataaagctgtgatacacaaaattcctaaaaaagaagagatagaagcttatcacaagaaa
atggagatcatgcttcaggacatatttggagaagactgtgtaagtgcaaagaaggataac
atactgagcatcactgtggatggaaaaacagccaatctttcattggatacacggactgtt
gatcatgaaccaggatgtgaagatgatgatgaaactcttcgggaaatggtggagttagca
gcacagagactctatgatgccatcactcctttacaataa
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