Anolis carolinensis (green anole): 100564591
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Entry
100564591 CDS
T01608
Symbol
col25a1
Name
(RefSeq) collagen type XXV alpha 1 chain
KO
K24356
collagen type XXV alpha
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acs00536
]
100564591 (col25a1)
Glycosaminoglycan binding proteins [BR:
acs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100564591 (col25a1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100564591
NCBI-ProteinID:
XP_016849619
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All DBs
Position
5:144665621..145013029
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AA seq
658 aa
AA seq
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MVSKNPDAGGQDAKGKVGCFGDQRCCPNWTAPLAWLLPALLLSLISIAASVYLGVKTGDL
QVRVSAIESARGDISADAASYLTLPGYSLDQLNSLVQDKVERLLAQKSYEHMAKIRTARE
ATPECNCPPGPPGKRGKRGRRGEIGPPGQPGPQGSPGPKGEKGDQGDQGPRMVFPKINHG
FLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGAPGDPGKPGEQ
GLMGPHGPPGQKGSFGAPGVPGMDGSQGEPGEVGEGGPPGLKGDPGQQGEKGDAGDSGPK
GDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPG
LPGTKGERGDAGPPGKGERGEPGAPGPKGRSGESGARGPKGSKGEPGENGGLGATGPRGP
PGQKGDQGATEIIDYNGNIHEALQRITTLTVTGPPGPPGPQGLQGIKGDPGSPGLPGAEG
EQGLKGSKGDMGDPGIPGEKGGIGLPGLPGSSGTKGDKGDVGLPGPQGPSIIGPPGPPGP
HGSPGPMGPHGLPGPKGMDGPVGPHGLAGPKGDRGEKGIPGDPGPRGPYGLPGKDGEPGL
DGFPGPRGEKGDVGERGEKGFRGIKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaaaaaccccgacgccgggggtcaggatgccaaggggaaggtgggctgcttc
ggggaccagcgctgctgccccaactggactgcgcccctggcctggctcctgcccgccctc
ctcctctctctcatctccatcgctgcctctgtctatctgggagtgaagaccggtgacctt
caagtcagggtctccgccatcgagagtgcccgaggggacatatctgctgatgctgcttct
tatctgacactgcccggctattctttggatcagctgaattcactggtacaggacaaagtg
gagcggcttctggctcagaagtcctatgagcatatggcaaaaatcagaacagcaagagaa
gctactccagaatgcaactgcccaccaggtcctcctggtaaacggggtaaacgaggaaga
agaggagagattggaccccctggtcaacctggccctcaaggctcacctggtccaaaaggt
gagaagggagatcaaggtgatcagggcccacggatggtgtttcctaaaatcaatcatggg
tttctctctgctgatcagcagctcattaaacgccgcctcattaagggtgaccaaggacaa
gctggaccacccggacctccagggcctccaggaccaagaggccctcctggggatactggc
aaagatggccctcgtggaatgccaggtgcaccgggtgatccaggaaagccaggtgaacaa
ggcttgatggggcctcatgggcctccaggacaaaagggttcgtttggtgcacctggtgtt
ccaggaatggacggaagtcagggagaacctggtgaagtgggagaaggtggaccaccaggg
cttaagggtgatcctggacagcaaggagaaaagggtgatgctggagatagtggacccaaa
ggtgacaccggagaaaagggtgaccctggatcttctgctgcaggaattaagggagaacct
ggagaatcggggcgacctggacaaaagggtgaacctggactacctgggctaccaggatta
cctggaattaagggtgagccaggtttcttgggtccacagggagaacctggattaccagga
ttaccagggacaaagggtgaacggggagatgcggggcctccggggaaaggcgaacgaggt
gagcctggagctcctggaccaaagggaagatcaggtgaatctggagctagaggtccaaag
gggtcaaagggtgaacctggagagaatggtggactgggagccacaggcccacggggccca
cctggacaaaaaggtgaccaaggtgccacagagatcattgactacaatggcaatatccat
gaagccttacagaggattaccaccctaactgtcacgggtcctccaggcccacctggaccc
caagggttgcaagggataaagggtgaccctggatccccaggattacctggtgctgagggg
gagcaggggctcaaagggtcaaagggtgatatgggagaccctggaataccaggagaaaaa
ggaggaattggacttccaggattgccaggctccagtggcacaaaaggagacaaaggagac
gttggtttgccaggtccacaaggtccttctattataggaccaccaggacctccaggccca
catggttcacctgggcctatgggacctcatggactgccaggcccaaagggtatggatggt
ccagttggtccacatggccttgcaggtccaaaaggagacaggggtgaaaagggaattcca
ggagatcctgggcccagaggaccatatggcttgcctggaaaagatggcgaacctggcctc
gatggtttccctgggcctcgtggagaaaagggtgatgtaggagaaaggggagaaaagggt
ttccgtggaattaagggggaaaaaggggagccaggccagccaggcctggatgggctggat
gccccttgccaattggggccagatggattaccaatgcctggctgttggcaaaagtga
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