Anolis carolinensis (green anole): 100564708
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Entry
100564708 CDS
T01608
Symbol
col4a3
Name
(RefSeq) collagen type IV alpha 3 chain
KO
K06237
collagen type IV alpha
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04382
Cornified envelope formation
acs04510
Focal adhesion
acs04512
ECM-receptor interaction
acs04518
Integrin signaling
acs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100564708 (col4a3)
04518 Integrin signaling
100564708 (col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100564708 (col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100564708 (col4a3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100564708 (col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acs04147
]
100564708 (col4a3)
00536 Glycosaminoglycan binding proteins [BR:
acs00536
]
100564708 (col4a3)
Exosome [BR:
acs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100564708 (col4a3)
Glycosaminoglycan binding proteins [BR:
acs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100564708 (col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100564708
NCBI-ProteinID:
XP_008104462
Ensembl:
ENSACAG00000004217
LinkDB
All DBs
Position
3:complement(23465229..23573119)
Genome browser
AA seq
1682 aa
AA seq
DB search
MGAAGRPGSWPLALLLAAASLLALHGQDMDPFPVAFAAKNCVCKGKNHCYCDGTKGSKGE
KGFPGYPGQSGQMGFPGPEGPPGLQGPKGFPGPVGIPGPKGSRGIPGIPGYSGPPGLPGK
PGNAGPPGRLGIPGCNGTKGERGFPGFPGQEGLPGLPGPKGTKGLKGCSATAYDRGYSSQ
GEPGMPGRPGFPGEPGPRGVPGELGLEGPPGFPGSPGIPGVPGPKGLMGTKVIGAKGIKG
DLGLMGPPGPTGTVIVTLTRADNTTELKGDKGDMGSPGPPGPQGASGLPGDFRSIRGETG
EPGPQGRPGRDGPSGPPGLQGEKGEQGFPGLPGKDGLKGRKGDPGRQGNQGLIEYYDEMP
GEKGNKGYIGLPGLKGEPGAPGPRGPDGAIGRPGISRPGPRGLPGSPGVRGKKGDRGQPG
MNAIGPPGPPGMPGLPGPAGSPGLSGQPGIITFERGPEGTAGIQGCVGPPGLSGDNGEKG
EQAGPCNQCTYTTGPPGLPGTPGAEGLQGVKGVVGMIGPKGSQGSPGQPGPPGIQGLPGI
QGNQGRKGSKGVPAYVDPEGPRGDRGEAGLRGTSGERGMDGLPGEPGLKGTRGSVGAQGS
DGPKGDRGPQGSSGSPGLPGEVGLSGPPGYGPQGLKGSQGTQGDPGPSGLPGTSGPKGDP
GMVIAIPGAPGLQGPAGRPGLQGVRGSVGSRGQRGDPGLPGPDGDPGLVQIGFPGYPGLK
GDKGLQGSTGPPGCPGTLGEPGLPGRPGISGEKGEPGPFIPGAQGRLGSPGEEGMPGEKG
ERGFPGLQGPPGQQGQDGADGPRGEPGSPGVPGEKGVPGKMGDCLVGLPGPPGPCGVVGP
PGGRGAIGAKGDPGIPGLDIPGFPGQFGLPGIPGPQGNDGPPGNKGQPGRPGVPGIPGPR
GEMGLMGPVGNPGLSGVPGNPGIPGIRGSPGFSGLKGRKGSSGEKGEPGDKGFPGISESI
MHSGDKGDRGAKGFPGRMGLKGEKGEQGAQGCAGLNGIPGTPAPTGPKGGKGLPGVLGRP
GLPGPPGDRGDMGVPGIRGERGSPGLPGSSGLPGSPGTPGMPGDKGEAACPGTGPPGNPG
PKGDAGLPGERGQKGEKGSPGQPGLIGEPGRQGNRGDAGSPGIPGFPGPAGDNGRKGSKG
LPGQNGIKGYPGPSGLSGDDGPVGEKGNQGRDGIPGHPGEKGEQGSPGQIIPGPPGIPGM
KGIKGSMGMAGVPGRPGAKGLRGDPGPRGPPGIPGQTGPSGKPGMAVAGPKGNRGLPGLD
GKPGVPGIPGPTGFPTYSIKGSKGVRGTDGLPGPPGPRGDAGLPGPPGTEGVPGYPGQRG
DSGFPGFPGIKGEKGNRGPPGPTGVAGHGGPKGLPGQPGPAGKAVSFPGDPGPAGPPGIP
GSVGDPGPRGPLGLPGPPGIKGQPGRPGIPGVGGPPGLKGDKGFQGQKGLPGLLGFPGIQ
GLPGFPGTSLPGPPKRGFMFSRHSQTTKIPSCPSGTVQIYSGYSLLFVQGNEQSHGQDLG
TVGSCLQRFTTMPFLVCNPNNICRFASRNDYSYWLSTAEPMPSDMKPISGKALEPYISRC
IVCEGPAMVIAVHSQTTSVPPCPQEWQSLWRGFSFVMYTGAGSEASGQALASPGSCLENF
YAIPFIECHGRGTCSYYSNSYSFWLASLNTRRMFRKPLPQTLKAGELEKIISRCQVCMRK
SN
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagcggggcggcccggctcttggcccctggccctgctcctggccgccgcttcc
ctgctggccctccacgggcaggacatggaccccttccccgtggccttcgccgccaagaac
tgtgtatgcaaaggcaaaaaccactgctattgcgatgggacaaaaggcagtaagggtgaa
aaaggctttcctggttatccaggtcaatctggtcagatgggatttcccggtccagaaggt
cctcctgggttgcaaggacccaagggatttccagggccagtaggcattcctgggcctaaa
ggttcaaggggtataccaggaatccctggttattcagggcccccaggcctaccaggtaag
cctggaaatgctggccctccaggacgtttaggtataccagggtgcaatgggacaaagggt
gagcgaggattcccaggattcccagggcaagagggtttaccaggattaccaggtcctaaa
ggcaccaagggattaaaaggatgctctgcaactgcatatgaccgtggttatagttcccaa
ggtgaacctggaatgccaggaagacctggatttccaggagaaccaggacctcgaggggta
ccaggagagcttggtctagaaggccctccaggatttccaggctcaccaggaatcccagga
gtcccagggcccaagggtctcatgggtactaaagtcattggtgcgaaaggaattaagggt
gaccttggactaatgggccctcctggaccaacaggaactgttattgtgacactaacccga
gcagataatacaacggaattaaaaggtgacaaaggggacatgggttctccaggaccccct
ggacctcaaggagcatcaggcttgcctggtgattttcgaagtataagaggggaaactggg
gaacctggacctcagggtaggcctggaagagatggcccttctggtcctcccggtttacag
ggagaaaaaggagagcagggtttcccaggattgcctgggaaagatggtctcaagggaaga
aaaggtgatcctggtcggcaaggaaatcagggtctaatagagtattacgatgaaatgcct
ggtgaaaaaggaaataagggctacataggactgccaggacttaaaggcgaacctggagca
ccaggaccacggggtcccgatggtgccattggtaggccaggtatttcaagacctgggcca
agaggtttaccaggctcgccaggtgtcagaggaaaaaagggagacagaggacaacctggc
atgaatgctattggaccacctggacctcctggaatgccaggactgcctggcccagcagga
tctccaggtctttcgggacaacctggtataataacttttgaaagaggcccagaaggaact
gcaggaatccaggggtgcgtggggcctcctggcctatcaggagataatggagaaaagggt
gaacaagcaggtccatgtaaccaatgtacctatactacgggaccacctggccttcctggt
actcctggggcagaaggtctgcaaggagttaaaggtgtagtaggaatgattggacctaaa
ggatcccaaggatcacctgggcagccggggcctcctggaattcaaggacttccaggtatt
caaggaaaccaaggtcgtaaggggtcaaaaggtgttccagcctatgtggatccagaaggt
ccaagaggagacagaggagaagcaggtctcagaggaacttctggagaaaggggaatggat
ggcttaccaggagaacctggattgaaaggcacaagaggttctgtaggagcacagggatct
gatggtccaaaaggagacagaggtccacaaggatcatctggtagcccaggtcttcctgga
gaagtagggctatctgggccaccaggatacggaccacaaggattgaaaggctctcaaggc
actcaaggagatcctgggccgtctgggttgcctggaacaagtggtcctaaaggcgatcct
ggcatggtgattgcaattcctggagcacctgggcttcaaggtccagctggcagacctggt
ctacaaggtgtaagaggtagtgttggatccagaggacagcgtggtgatccaggcctccca
ggaccagacggtgacccaggcttagtacagattggatttcctggctatcctggtttgaaa
ggagataaaggtcttcaagggtctacaggaccaccaggatgtccaggaacattaggagaa
ccaggcttgcctggaagacctggaatttcaggagaaaagggtgaaccaggcccatttatt
cctggagctcagggaagattgggttcaccaggtgaagagggaatgccaggtgagaaaggt
gaaagaggattcccaggtctccaaggacctccaggtcaacaaggtcaagatggtgctgat
ggtccaagaggagagcctggatcccctggagttccaggagaaaaaggtgttccaggaaaa
atgggagactgtcttgttggcttaccaggaccaccaggtccatgtggagtagtaggtcca
ccaggaggccgaggagcaataggagccaaaggagacccaggaatcccaggattagacatc
ccagggtttccaggacaatttgggctgcctggaatccctggcccacaaggaaatgatggg
ccacctggcaataaggggcagcctggcagaccaggagtgccaggtataccaggtccaaga
ggagaaatgggcctcatgggtcctgtaggtaatcctggattatctggtgtccctggaaat
ccaggtatccctggaataaggggttctcctggcttttcaggactaaaaggaagaaagggc
tcttcaggggagaaaggtgagccaggggataaaggcttccctggaatatcagagtccatt
atgcattccggagataaaggagacaggggagctaaaggatttccaggaagaatgggactc
aaaggagaaaaaggggagcaaggtgcacaaggatgtgcaggtcttaatggcataccagga
acaccagccccaacaggtcccaaaggggggaagggacttccaggagtccttggcagacca
gggttaccaggacccccaggagacagaggagacatgggagtgccaggtataagaggtgag
cgaggttctccaggtttgcctggatcatcaggtctaccagggtcacctggcacacctgga
atgccaggagataaaggagaagcagcctgtcctggaactgggcccccaggaaacccagga
cctaagggcgatgctggtctaccaggagaaagaggacagaaaggagaaaaaggatcacca
ggtcagccaggactgataggagagcctggacgacagggaaatagaggggatgctggttca
ccaggaattccagggtttccaggacctgcaggcgataatggccgtaaaggtagcaaagga
ttgccaggacaaaatggcatcaaaggctatccaggaccaagtggtttatctggtgatgat
ggaccagttggtgaaaagggtaaccaaggacgtgatggtattcctggacaccctggagaa
aagggagaacaaggttccccgggtcaaataatccctggtcctccaggcattcctggtatg
aaaggcatcaaaggcagcatggggatggctggtgttccaggacgtccaggtgctaaaggt
ctcagaggggacccaggacctagaggacctcctggtatacctgggcagacagggccttct
gggaaaccaggcatggcagttgctggcccaaaaggaaaccgtggcctcccgggtctggat
ggaaagccaggtgttccaggtatcccaggacccactggattccccacctatagtattaaa
ggaagcaaaggtgttcgaggaacagatggcttacctggtccaccaggacctaggggtgat
gctggtctacctggtccaccaggaactgaaggtgttcctggttatccaggtcagagaggt
gattctggtttcccaggatttccaggcataaaaggagagaagggtaatcgtgggccacca
ggaccaacgggtgtggcagggcatggaggtccaaagggactacctggtcagcctggacca
gctgggaaagcggtttcttttccaggagatccaggaccagctgggccaccaggaatccca
ggaagtgtaggagacccagggcctagaggaccacttgggctgccagggcctccaggtata
aagggccaaccaggtcgtcctgggattccaggtgtgggtgggccacctggactaaaagga
gacaagggatttcaaggccaaaaaggtttgccaggattgcttgggtttcctggaatacaa
gggctccctggattcccagggacttccttaccaggtccaccaaaaaggggcttcatgttt
tctcgacatagtcagacaacaaagatcccttcatgtccatctggaacagttcagatctac
agtggatactctcttctttttgtacaagggaatgaacaatcacatggacaagacctcggt
acagttggtagctgtcttcaaagatttaccaccatgccttttttagtatgtaatcccaat
aacatttgtagatttgcttctcgcaatgactattcatactggctgtcaacagcagagcca
atgccttcagatatgaagcctatttctggaaaagccttggaaccctatattagcaggtgt
attgtctgtgaaggccctgcaatggtcatagcagtccacagtcagacaacttcagttcca
ccgtgtcctcaggaatggcagtctctatggagaggattttcttttgttatgtacacaggt
gcaggctcagaagcttccggacaagctctggcatctccggggtcatgcttagagaacttt
tatgccattccatttattgaatgtcatggacgagggacatgcagttattactcaaactcc
tacagcttctggctggcctcgctgaacacaagaagaatgttcaggaaaccattgccgcag
actctgaaagctggagaactggaaaaaataatcagccgctgtcaagtttgcatgaggaaa
tccaattaa
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