Anolis carolinensis (green anole): 100565562
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Entry
100565562 CDS
T01608
Symbol
ddx39a
Name
(RefSeq) DExD-box helicase 39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100565562 (ddx39a)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100565562 (ddx39a)
Spliceosome [BR:
acs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100565562 (ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100565562
NCBI-ProteinID:
XP_003217350
Ensembl:
ENSACAG00000010756
UniProt:
G1KKJ7
LinkDB
All DBs
Position
2:118795215..118812998
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AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAVNDATPVPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPTDGQVSVLVMCH
TRELAFQISKEYERFSKYMSAVKVSVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALVR
NKTLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDTEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDESDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaggatgtggagaatgaattactggactatgaggaggacgaagagccccag
gcagtgaatgatgccacccctgtccctgctaaaaaggacgtgaagggttcttacgtttcc
attcacagttctggcttccgtgacttcctgctcaagccagaactgcttcgtgccattgtg
gactgcggttttgagcacccatcagaagtgcagcatgaatgcattccacaggcaatccta
ggcatggatgttttatgccaagccaagtcaggcatgggcaagacagctgtctttgtattg
gctacgctgcagcagattgaaccgacagatgggcaagtatcagtgttagtgatgtgccac
acccgggagctggccttccagatcagcaaagaatatgagcgcttctccaaatatatgtct
gctgtcaaggtatcagtcttctttgggggcctttccatcaagaaggatgaagatgtgttg
aaaaagaattgtccgcatatcgtggtggggaccccaggccgtattctagcacttgttcgc
aacaagacgctcaacctgcgcaacgtgaagcattttgtgttggatgaatgtgataagatg
cttgagcagctggacatgcgccgggatgtgcaggagatttttcgactgactcctcatgag
aaacagtgtatgatgtttagtgccaccctgagcaaagagatcaggcccgtttgcaggaag
ttcatgcaggatcctatggaggtgtttgtggatgatgagaccaagttgactctccatggc
ctgcagcaatactatgtgaagctgaaggacacagagaagaaccgcaaactctttgaccta
ctggatgtgctagagttcaaccaggttgtgatatttgtgaagtcagtgcagcgctgcatg
gcattggctcagcttctggttgagcagaacttcccagccatcgctattcacagaggcatg
actcaggaagagagactctcaagataccagcagtttaaggacttccagcgtcggatcttg
gtggccacaaatttgtttggacgtgggatggacatagagagggttaacattgtattcaac
tatgacatgcctgaggattcagatacctatttgcacagggtagccagggccgggcgcttt
ggtacaaaaggtctggctgttacctttgtgtcagatgaaagtgatgccaagatactcaat
gatgtgcaggaccgctttgaagtcaatgtagctgaactccctgaagagatagacatctcc
acgtatattgaacagagccggtag
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