Anolis carolinensis (green anole): 100566032
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Entry
100566032 CDS
T01608
Symbol
tnrc6b
Name
(RefSeq) trinucleotide repeat containing 6B
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100566032 (tnrc6b)
03036 Chromosome and associated proteins [BR:
acs03036
]
100566032 (tnrc6b)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100566032 (tnrc6b)
Chromosome and associated proteins [BR:
acs03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100566032 (tnrc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
100566032
NCBI-ProteinID:
XP_016849192
LinkDB
All DBs
Position
5:25626612..25748092
Genome browser
AA seq
1863 aa
AA seq
DB search
MQTDEGEILQEGSSKMEHEDFVMEGHGKTPPPGEENKQEKEQEKEEQLMEDKKRKKEDKK
KKESTQKVSQVTDQKTKVPEATKPSLSQPVTASPIGSSPSPPVNGGNNAKRVAVPNGQPP
SAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGSGVGLSASSAPGANPNNAQPVP
GVLLPCDSGSATDSITGGAAASNYANSTWGPGASSNSTNANPTHVWDKVIVDGSDMEEWP
CIASKDTESSSENTTDNNSASNLGLEKNTLPGSTTSNKGKGNQCQSGSSGNECNLGAWKS
DPKAKSVQSSNPASESTSGLTNWRNVSGQDRVGPSPGFTNFNPNSNPSAWPALIQEGNSR
KGNSESDNGGSNAQINTAGQTSREQQSKMENAGVNFVSCREQAQIHNTDGPKNGNTNSLN
LSSPNPMENKGMSFEMGFGNPSRSTEAPSQSTGEKKTGSVGSWGTVRGTSGMDSASCQSN
SGNHGNNGKDREDSWKGASVQKSNGSRNDSWDNSNRSTGDGSWTIGPQHSSESKWSEGNK
MTSGVSQGEWKQPSGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGRS
SSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNT
GWGQTQIKQDTVWDIEEMPRAEGKTDKGTEGWESSTIQTKSSGGWGDAPSQSNQIKSGWG
ELSTPTEWKEPKNTGGWNDYKNSSTNWGGGRPDEKVTTSWNENSNKDPGWNGRPPNQGWS
SGKNGWGEDVEQTKNNNWESSASKPMSSWGEAGQNEIGTWGNSANANCSSKGGWDNNNKR
TPTWNDTGRQPNSWNNQQQPHHQQSETPGSWGPPPQPPGNGRPPNPNWNSGPQPNASKDD
EPSGWEEPSPQSVSRKMDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQNLPTPRP
SKVATSVWNKSTPPAPDNGTAAWGEPNETTTGWGEVDDAGASTSWGNGSSSASNAIKSSS
KPTQDGWGDNDGPVSTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKPQIKCSL
KGGSNDSWMNTLSDQISNMGLLNQPEDTPGNKMDLPIGGLQDKKFDVDKRGMNLGDFNDI
MRKGRSGFRPPNSKDMGTPDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPNYKLSPSG
STLPNVCLGAIGSGLNPPNFAARQGGNQGLFGNSTAQSRGMHPPVQPLNPSPNIRAQVPP
QFLSPQVSAASMLKQFPNSSLNPGLFNMGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQ
QQQQQQQLLQNQRKISQAVRQQQEQQQLARMVSAFQQQQRQPGMKHSPSHPVGPKPHIDA
IVSGGLNVGLSDISTKGQIPGYGSGFGSSGMDYGMVGGKETGSESRFKQWTSMMDGLPPV
ASQDANMHKNGTIVPPGKARGGSPYNQFDIIPGDPLGSHTGPAGDGWLPAKSPPTSKIGS
KSSNASWPPEFQPGVPWKGIPNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGS
NSSLNTSLPSPGAWPYSASDNSFANVHSTSAKFNDYKSTWSPDPIGPNPAHLSNKMWKNH
ISSRNTTGLPRPPPGLSNPKSSSPWSSTAPRSLRAWGAQESRLASASTWSDGGSVRASYW
LVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLG
NTTILAEFATDEEVSRFLAQAQPPPAATPSTPAAGWQSLETGQNQTDPVGPALNLFGGST
GLGQWSSGGGGNSGGDLAGASLWGPPNYSSSLWGVQSVEDPHRMGSPAPLLPGDLLGGGS
DSI
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatgagggagaaattttgcaggaaggcagttccaagatggaacatgaggat
tttgtaatggaagggcatggcaagactccacctcctggtgaagaaaacaaacaagaaaag
gagcaagaaaaggaagaacagttaatggaagacaagaaaagaaagaaagaggataagaaa
aagaaggaatctactcagaaggtaagccaggtcacagatcaaaaaaccaaagtgcccgaa
gcgacgaaaccaagtttaagccaaccagtgaccgccagcccgattggcagctctccatcg
ccacctgttaatggtggcaacaatgccaaaagggtggcagtgccgaacggtcaaccgcca
agcgccgcgcgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccac
aaagtgttactgaaacgtgggcagccccctccgccatcctgtatgctccttgggagtgga
gtagggttgtctgcttcttcagcacctggagcaaatccaaacaacgcacaaccagtacca
ggagtgttgctgccgtgtgacagtgggtctgcaacagattcaataactggaggtgctgct
gcttcaaattatgcaaattccacttggggtcctggagcctcctccaacagcaccaatgcc
aacccaactcacgtctgggacaaggtgattgtagacgggtctgacatggaagagtggcct
tgtattgccagcaaagatacagaatcttcttccgaaaacaccacagacaacaacagtgcc
tcgaaccttggtttagagaagaacactctgccaggaagcaccactagcaacaaaggaaaa
ggaaatcagtgccagtctggaagctctggtaacgaatgtaatcttggggcttggaaatct
gaccctaaggctaaatctgttcaatcttccaaccctgcatcagagagtaccagtggtcta
acaaactggaggaacgtgagtgggcaggacagagttggacccagtcctggcttcaccaac
tttaacccaaatagcaacccatctgcttggccagcactaatccaagagggtaactcaaga
aaggggaattcagaatctgataatggtggatccaatgcacagatcaatacagcaggtcag
acttctagggaacagcagtcaaagatggaaaatgcgggtgttaactttgtctcttgcaga
gaacaggctcaaattcacaacactgatggaccaaaaaatggaaacactaactccttgaac
ttaagttcaccaaacccaatggagaataagggaatgtcctttgaaatgggctttgggaac
ccctccaggagcactgaagccccttcacaaagcactggagagaaaaagactgggagtgtt
gggtcttggggtacagttagggggacttctggaatggacagtgcttcttgtcaaagcaat
tctggaaatcatgggaacaatggaaaggatagggaggactcatggaaaggagcttctgtt
caaaaatcgaatgggtcaagaaatgattcttgggataacagtaacaggtctacgggtgat
gggtcttggaccattggccctcaacactctagtgaaagcaaatggagtgaagggaacaaa
atgacatcaggggtgtctcagggagaatggaaacagccgtctgggtcagatgaattgaag
attggagaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaa
aagggccacccccttcctgaaaatcaaggcaattcccaggctccctgttggggaagatct
tccagctctacaggaagtgaggttggaggtcaaagcactggaagcaaccataaagcagga
agtagtgatagtcacaattctggacgtcgatcatacaggcctacacatcctgattgccaa
gcagtcttgcagactttgttgagcaggactgatttggacccccgagtgctttcaaatact
ggatggggtcaaactcaaatcaagcaagatactgtttgggacatagaagaaatgccaagg
gcagaggggaagacggataaaggaactgaggggtgggagagttctaccatacagacaaag
agctcagggggctggggagatgcacccagccaaagcaatcaaatcaagtctggatggggt
gagctctctactccaacagaatggaaggagcccaaaaacactggaggatggaatgattat
aagaatagcagtactaattggggaggaggaagacctgatgagaaagtgacaacatcttgg
aatgaaaattccaacaaagacccaggttggaatgggcggccacctaatcagggttggtct
tctgggaaaaatggctggggagaggatgttgaacaaacaaaaaataacaactgggaaagt
tcagcaagcaagccaatgtcaagttggggggaagccggtcaaaatgaaattggaacttgg
ggtaatagtgcaaatgcaaactgttcttcaaaaggagggtgggataataataataaaaga
actccaacatggaacgatactggtagacaacccaattcctggaataatcagcagcagcca
caccaccagcagtcagagacacctggctcctggggcccaccgccacaacctccaggtaat
gggaggccacccaatcctaactggaacagtgggccacagccaaatgcctcaaaagatgat
gagccaagtggctgggaagaaccatccccccaatcagttagtcgaaaaatggatattgat
gatggcacttcagcatggggtgaccccagcagttacaactataagaatgtgaatctgtgg
gataagaactcacaaggtggacaagctccacgagaacagaacctcccaactccaagacca
agcaaagtagcaacctcagtctggaacaaaagcacacctcctgctccagataatggtaca
gctgcttggggtgaaccaaatgaaactaccacaggatggggtgaagttgatgatgcaggg
gcttctaccagttggggaaatggatcatccagtgcatcaaatgccataaaatctagttcc
aaaccaacacaagatggctggggggataatgatgggccagtatcaacacggcattccagt
tgggaagaggaagaagaaggaggagtctggaacacagcaggctctcagggaagtagttcc
tcccataattcaacaagctggggacaaggaggcaaaaaaccacaaattaagtgttcatta
aaaggaggaagtaatgattcatggatgaatacattatctgatcaaatttcaaatatggga
ttgctgaatcaacccgaggatactccaggcaataagatggacttaccaataggtgggctt
caggataagaagtttgatgtggacaaacgaggcatgaatcttggggatttcaatgacatt
atgagaaagggccggtctggttttcgtcctccaaattccaaagacatgggaaccccagat
agtgggccttattttgaaaagctgactttgcctttctccaatcaagatgggtgccttggg
gatgaggctccctgctctcccttctccccttctcccaactacaagctgtctccctctggt
tccacactacccaacgtctgccttggggcaatcggctcagggctcaaccccccaaacttt
gctgctagacaaggtggcaatcaaggtctgtttggaaacagcacagcacaatcgagagga
atgcatccaccggtgcaaccactgaatccttctcccaatatccgggcacaagtgcctcct
cagtttctttctccccaggtgtctgctgcctccatgcttaagcaatttcctaacagtagc
ttgaacccgggtcttttcaacatgggtccccaactttctcctcaacagattgctatgctg
agtcaacttccacaaattcctcagtttcagcttgcatgtcagctcctcctccagcaacag
cagcaacagcagcagcaacaactgttacaaaatcagagaaagatttcccaagctgtacga
caacagcaagagcaacagcagcttgcccgtatggtgagtgcctttcagcaacagcagagg
caacctggcatgaaacattccccatcccatccagttgggcctaagccacatatagacgct
atagtgtctggaggtctaaatgtgggtctctcagatatctcaaccaaagggcaaattcct
ggctatggttcaggttttggttcaagtggcatggattatggcatggtaggagggaaagag
actggatcagaatctcgctttaaacagtggacttctatgatggatgggctgccacctgta
gcttcccaagatgccaatatgcacaaaaatgggacaattgtgcccccaggaaaagcccga
ggggggtcaccctataaccaatttgatataatcccaggcgacccattgggcagccacaca
ggccctgctggtgatggttggttacctgccaaatctccaccaacaagtaaaattggaagc
aaatccagcaatgccagctggcctccagagtttcagcccggagtgccatggaaaggtatt
ccaaacattgaccctgaatctgacccctatgtgaccccaggaagtgtgctggggggtaca
gccacatcccccatagtagatactgatcatcaacttctacgggacaacaccacagggtct
aattcttccctcaacacctcgctgccttcacctggtgcctggccctatagtgcctctgac
aattccttcgcaaatgttcatagcacttcagcaaagttcaatgattacaaatcaacgtgg
tccccagatcccataggacctaatcctgctcatctctccaacaagatgtggaaaaaccat
atttcctcaagaaacactacagggctgccccgcccaccacctggtctgagtaatcctaaa
tcatcctctccctggagcagcacagcaccccgctcactcagggcgtggggggcacaggag
tcaagacttgcctctgcctctacttggagtgatggtggttccgttcgtgccagctattgg
ctggttcttcataatctcactccgcagattgatgggtcaactttgaggactatctgcatg
cagcatggtccactgctgacattccatctgaacctgacccaaggcaccgcccttatccga
tacagcaccaagcaggaggcagccaaggctcagactgcactgcacatgtgtgttttggga
aacactaccatcctggctgagtttgccacagatgaggaggttagtcgctttctggcacaa
gcccagcctccacctgcagcaacacccagcacacctgcagcaggctggcagtctctagag
acaggacagaatcagacagatccagtgggacctgctttgaatctttttggtgggtcaaca
gggcttgggcaatggagcagcggcggtggcggcaacagtgggggtgaccttgctggtgct
tcattgtggggccccccgaattattcttcaagtttatggggagttcaaagcgttgaagat
ccccacaggatgggaagccctgctcccttactacctggagaccttctaggtggagggtcg
gattcaatctga
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