Anolis carolinensis (green anole): 100566171
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Entry
100566171 CDS
T01608
Symbol
arhgef12
Name
(RefSeq) Rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04270
Vascular smooth muscle contraction
acs04625
C-type lectin receptor signaling pathway
acs04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100566171 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
100566171 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
100566171 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acs04131
]
100566171 (arhgef12)
Membrane trafficking [BR:
acs04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100566171 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Ribonuc_2-5A
Pept_S41_N_bact
AAA_23
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100566171
NCBI-ProteinID:
XP_016850202
LinkDB
All DBs
Position
a:1404186..1486644
Genome browser
AA seq
1529 aa
AA seq
DB search
MSGSQSAITDRFPLRRPTRHGSILSRESPADKKQKVERCISAHDFDPTDSSSRKTKCSSD
ESRSETYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSELDPAAFGHMSPIMTSPHSP
GASGNTERITSPVLMGEENNIVHSQKVEILRKMLQKEQERLQSLQEDYSRSPASQLLKEI
QEAKKHIPQLQEQLSKATGSIQDGVLSSKSVMESLQISEIEAERGDGLNRGDGSFGDSSH
MNSDTAESPRSGLRERMSLEESPEKSETQDTDSQSSIGSPSSRMAPPIIGAEDDDFDGEQ
EQINGQCSCFQNIELLKSRPAHLAVFLHHVVSQFDPASLLCYLFADLYKQTNSKETRRVF
AEFNQFFLDKSANLKVPIPDEISVDLEKRRLDLIPEELHRHYIHTMQEKVLPEVHRHLED
FRQKRSMGLTLAEGELTRLDAERIRDRTTQEKERVCAEQIISKIEEVLMTSQPIEEEKSS
SIQYVVLTYMKHLGVRVKEPRSLDQKRGRIGFLPKIKVKQSIKKEKEGDEKKRRVFPNIL
GPPRRPSRHDSYAIGRAMEIQKQRHPKHLSSSSSISPEPPESARMRQSSSIESTDAAHPP
ANLVSPLAAGSSPSQEGSKDSEAGSKQVGETPPSGDSVDGTPRTTNTIFDFPSPPLDHLL
EEEGDFDRLAESGTPKSFRKMDSVGAGDIQSEDELFEFDMETDPPNWQQLVSREVLLGLK
PSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILPHSELRKIFSNLEDILQLH
AGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGAGEDKLKQATATFCSNQPFALEVIKSRQ
KKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYSEQPGEKEKVKK
AADHCRQILNFVNQAVKEAENKQHLEDYQRRLDLSYLKQLEGPMLEEFRNLDLTRKKMIH
EGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILANAADSKHTFSPVIKL
NTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKTVWQELIARMAGTVKVGRRVIP
LHPPGPCEEDHEEEDQKLKEEQTTPESSMQSPDKDLELESPSATASEKAEAEELLEADRR
FREKAPGDLLIKESSDSFTHTGPELLFQISEDRWALDALRNLGLLKKLLMQQLGMTEQES
PEDRQRFSRHRAVSQGVQVEKSVLRGQQHSEKDRASLPGVSRMPSGMGTSSFEPCSGHRT
SGEFVQVGDTTPNSSQLTDPLSTNPETPIAELEGVTAEDGGEHFFDAREAHSDENHSEGE
VTERKDVEEVQLRISGNFLILDDYGAAQESSTDEEVASLVLRCTAGKSAMDSAPQAPASP
QEAQQPDPGASSPFAAREVEPSHWEATKEPSSSEVLRPPFSPESRSLIMHYIQKIEANLE
HLKEVEENYATLQQRLAGSVPTDEHSDKS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcacagtccgcaatcacggacaggtttcctctcagaagacctacaaggcac
ggcagcattctgagcagagagtctccagcagataagaagcagaaggttgagcgctgcatc
agtgcccacgactttgaccctacagacagctcctccaggaagacaaagtgtagctcggac
gagagtagatccgagacgtatggtcttgttcagcgttgtgttattatacagcgggatgaa
aatggatttgggttgacagtcagtggagacaatccagtctttgtgcagtctgtcaaagaa
gatggcgcagccatgcgggctggagttcaaactggcgaccgaatcattaaggtgaatggg
accctagtaacgcactcaaaccacctggaagtggtgaaactaataaagtcggggtcctat
gtagccctcactgtgcaagggcgcccacctgggtcgccccagatacctctggctgattct
gagttggatccagcagcgtttggtcatatgtctcccatcatgacatctcctcattcaccg
ggagcatcgggaaacacagagaggatcacaagtccagtactgatgggggaagaaaataat
attgttcacagccagaaagtggagattttgcggaagatgttgcagaaagaacaggagcgg
ttgcagtctttgcaagaagattacagccgctcccctgcctcccaactgctgaaagagatc
caggaggccaagaagcacatccctcagctgcaggaacagttgtccaaggcaacaggatcc
atccaggatggggttttgtcttcgaagtctgtgatggagtctttgcaaatcagcgagata
gaagcggaaagaggggatgggctgaatagaggagatggcagttttggtgacagctcccat
atgaatagtgatacggctgagagtccccggagtggcctgagagaacgaatgtctctcgaa
gagagcccagaaaagagtgagactcaagataccgactcacaatctagtattggaagcccc
tcgtctcgcatggcacccccaatcatcggagcagaggatgatgactttgatggtgaacaa
gaacagatcaatggacagtgcagctgtttccaaaacatagagttgctgaaatctcgccct
gctcacctggctgtctttcttcatcacgtcgtgtcccagtttgacccagcttctttgctt
tgctatctttttgctgacctctacaaacaaaccaactccaaagagactcgtcgtgtcttt
gctgagttcaatcaatttttcttggataaatctgcgaatctgaaggttccaatcccagat
gaaatttctgtagatttagaaaaaagacggctagatttgattcccgaagaactgcaccgc
cactatatccacacaatgcaagagaaagtccttcctgaagttcacaggcatcttgaagat
tttagacagaaacgcagcatggggttgaccttggcggaaggggagctgaccaggttagat
gctgagcgcatccgtgacaggactacgcaggagaaggagagagtctgcgcagagcagatc
attagcaaaattgaggaagtgctgatgacctctcagcccatagaagaagaaaagagttca
agcatacagtatgtcgtcctcacctacatgaagcaccttggtgtgagagtcaaagaaccg
cggagtctggatcagaaacgggggcggatcggattcctgccaaagatcaaggtaaagcaa
agtataaagaaagagaaggaaggggacgaaaagaagaggagagtcttccccaatatcctg
ggacccccaagaagaccaagccgccatgacagttatgcaataggcagagccatggaaata
cagaagcagcgtcatccgaagcacttatcctcctcttcctccatcagtccggagccacca
gagtctgccaggatgcgccaaagcagctccattgagagcacagatgcagcccaccctcct
gccaacctggtgtcccctctggcagccggttcctctccttctcaggaagggagcaaagat
agcgaagcaggttctaaacaagttggagaaactcctccttcaggcgactctgtggacggt
acgcctcgcacaaccaacaccatctttgatttcccatctcctccattggaccatttgctg
gaagaggaaggcgactttgacaggttagcagaatcaggaacaccaaaatccttccgcaag
atggacagtgtgggcgcaggcgatatccagagcgaagacgagctgtttgagtttgacatg
gagacggatccacccaactggcagcagctcgtgagccgcgaggtgttacttggcctgaag
ccatctgagattaaacgccaggaagtgattaacgaattattttacactgagcgcgctcat
gtccgtacactgaaggttctggaccaggtcttctatcagcgtgtgtctcgcgaagggatc
ttgcctcattctgaattgcggaagatattttcaaacttggaggatatccttcaactccat
gctggattgaacgagcagatgaaagcagtgaggaaacggaatgagacgtctgtcattgat
caaattggagaggacttgttaacttggttcagcggagcaggggaagataaactgaaacaa
gccactgccaccttctgtagtaaccaaccttttgctctagaagtgatcaagtcgcggcag
aagaaggattctcgcttccaaacttttgtccaggacgctgaaagcaacccactctgtcgc
cgactgcagctgaaagacataattcctaccgagatgcagaggttgaccaaatatcccctt
ctgctggataatattgcaaagtactcagaacaacctggggagaaggagaaagtgaagaaa
gccgcagatcattgtcgacagattctcaactttgtgaatcaagcagtcaaagaagcggaa
aacaagcagcatttagaagactaccagcgccggcttgatttgtcctatctgaagcagttg
gaaggccctatgctagaagaattcaggaatttagatttaaccagaaagaagatgattcat
gaagggcccctgacctggaaggtgaatcgtgacaagaccattgatctctacacgctgctc
ttggaggacattctggtgctgctgcaaaagcaagacgatcgactggtgctgaggtgccac
agcaagatcctggccaatgccgcagacagcaagcatacattcagcccagtcatcaaactc
aacacggtgctggtgcgccaagtggccacagataacaaagcattcttcgtcatctctatg
tcagaaaatggagcccatatttatgaactggtggcgcaaacagtctcagaaaagactgtg
tggcaggagctcattgcacggatggcaggaacagtgaaagtgggcagacgagtgattcca
ttacatccgccaggaccctgcgaggaagaccatgaggaagaagatcagaaactgaaagaa
gaacagaccactcccgagagcagtatgcagagcccagataaagatctggaactggagtct
ccctcagccaccgcatcggaaaaggcagaagcagaagagctcctggaggccgacaggcgg
tttagagaaaaagcaccaggggatctgctgatcaaagagtcctcggacagcttcacccac
acaggcccagagctcttgttccaaatctccgaagaccggtgggctttggacgcactacgg
aatttgggcttgttgaagaagttgctgatgcagcagctaggcatgactgaacaggagtcc
cctgaagaccggcagcgtttttccagacatagggcagtttctcagggggtccaggtggag
aaaagcgtcctcagaggacagcagcactcagagaaagacagggcatccttacctggggtt
agtaggatgccctccggcatgggaacaagtagttttgaaccttgctctggtcaccggact
tcgggtgagtttgttcaagtaggggacaccacaccgaatagcagtcagttaacggacccc
ttgagcacgaacccagagactcccattgctgagctggaaggggtcactgcagaggatggc
ggagagcatttctttgatgcccgtgaagcccacagtgacgagaaccattcagaaggtgaa
gtgacagaaaggaaggacgtggaagaggtgcagctgcggatctcaggaaattttttgatc
cttgatgattatggtgcagcccaggagagctccaccgacgaggaggtggcatcgttggtc
ctccggtgcactgctggcaagagcgccatggactctgccccccaagcgccagcatctccg
caggaggcccagcagccagacccaggagccagctcaccctttgctgccagggaagtggag
ccctcccattgggaagccactaaggaaccctcctcctcagaagtattaaggcctcccttc
tctccagagtcacgctccctgatcatgcattacatccagaaaatcgaggccaacctggaa
cacttaaaggaggtcgaggagaactatgcgactcttcagcaaaggctggctggatcagtc
cccacggatgagcactcagataaaagttag
DBGET
integrated database retrieval system
