Anolis carolinensis (green anole): 100566873
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Entry
100566873 CDS
T01608
Symbol
dcp1b
Name
(RefSeq) decapping mRNA 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100566873 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100566873 (dcp1b)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100566873 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
100566873 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
POT1_C_insert
Motif
Other DBs
NCBI-GeneID:
100566873
NCBI-ProteinID:
XP_008108474
Ensembl:
ENSACAG00000005541
LinkDB
All DBs
Position
5:756955..770617
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AA seq
611 aa
AA seq
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MAAGAAAGAVLPGAAPLGKGLDISLAALQRHDPYISSIVDVASQVALYTFGHRASEWEKT
DVEGTLFVYTRTASPKYGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIW
FYDKEECQRIAELMKNLTQQEQLKAQQGTIMGISPVSLNSGDSKEVDILRMLTKAKDEYT
KCKTCSEPKQITSSSAIYNNPNLIKPIPVKPSETPHQCASQQNQVCKTDPEPHHLSLTTL
FGKLEKSSACQDVPDLSQKLPPRQRVVRSLSYEEPGRHSPSTEKQLCPAIQKLMVRGGAE
LHPVSELPESRLCENGGKVFTGLFQPVAPHGVGAASHLVHNAATTQSLLQQLQGQPGQVA
KMEASNSVPPCPPASLFSRTAPASSVPQVKSTTQAPMLYFNGSLPGQTLGSPPALGKEQS
KLPKQPLPLSGNPPGSSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQSGPSL
KPLDSWIDKASNTEKQLPLFQQVISPQRIPATVAPSLLMSPMVFSQSGPAPPKPNESGWL
PVVNHETIPGSANLLLPLQNPEPPAGNLSPLTKLQLQETLLHLIRNDDNFLNIIYDAYVA
KSRREDSKKPL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggagcggcggcaggagcggttttgcccggagccgccccgctggggaagggg
ctggacatcagcctggcggctctgcagcggcacgacccttacatcagcagcatcgtggac
gtggccagccaggtggcgctctacaccttcggccaccgcgccagcgagtgggaaaaaact
gatgtggaaggaacactgtttgtttacacaagaacagcttcaccgaagtatggattcacc
attatgaacagactgagcatggaaaaccggaccgaacccataactaaagacctggacttc
cagctacaagaccctttccttctatatagaaatgccagattgtccatttatggaatttgg
ttttacgataaagaagaatgccaaagaattgccgagctcatgaaaaatttaactcagcaa
gaacagctgaaagcacagcagggaaccatcatgggaatttctccagtaagcctgaattca
ggtgatagcaaagaagtggatatcctgcggatgctcactaaagccaaagacgaatatacc
aagtgcaagacgtgttcagaacccaagcaaatcaccagctcttctgcaatatacaacaac
cccaacttgataaaaccgataccagtgaagcccagtgaaactcctcaccaatgtgcatcc
cagcagaaccaggtttgcaaaacggatccggaaccgcatcatttgtccctgacaacactc
tttgggaaactggaaaaatctagtgcatgccaagatgtcccagacttgtcacagaagctt
cctcccagacagagagttgtccgttccttgtcctacgaggagccgggcaggcattcaccc
tccacggagaagcagctttgcccggccattcagaaactcatggtgcgcggtggggccgag
ctgcacccggtctcagaactccctgagagccgactctgtgagaacggcggcaaggttttc
actggactcttccagcccgtggctcctcatggtgtcggtgcagcatctcatctggtccac
aatgcagccaccacacagagcttgctgcagcaactgcagggtcagccagggcaggtggct
aaaatggaggccagcaactctgtaccaccatgtccgcctgcatcactcttcagccggact
gctcctgcgtcctcagtcccccaagtcaagagtacaacccaggcacctatgttatatttc
aatggttccctcccaggtcagacattggggtctcctccagcccttggaaaggaacagtca
aaacttcctaagcagcctcttcctctctccggaaacccaccaggaagttctggagtaatt
tccccacaagagttgcttaaaaaactccaaatagtgcagcaggagcaacagttacatgtc
tccagtcgaccaaccttggcagctaagtttcctgtggttacccaaagcggcccctctctg
aaacctttggattcctggatcgacaaagcttcaaacaccgaaaagcagcttcctcttttt
cagcaggtcatctcaccgcagcggatccctgcaaccgtagctccttcgctcctaatgtcc
ccaatggtcttcagccagtcaggcccggctccaccaaaaccaaatgaaagcggctggctg
ccagttgtgaaccacgaaaccattcccggttcagcaaaccttcttctgcctctgcagaac
ccagaacctccggctggaaacctaagtccactgacaaagctgcagctacaggaaacgctt
cttcatctgattcggaatgacgacaatttcctaaacatcatctatgacgcttacgttgcc
aaatcgagaagagaagactcgaaaaaacctctgtga
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