Anolis carolinensis (green anole): 100567372
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Entry
100567372 CDS
T01608
Symbol
cpsf2
Name
(RefSeq) cleavage and polyadenylation specific factor 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100567372 (cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100567372 (cpsf2)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100567372 (cpsf2)
U7-dependent histone pre-mRNA processing factors
100567372 (cpsf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
100567372
NCBI-ProteinID:
XP_008110699
Ensembl:
ENSACAG00000009245
UniProt:
G1KIP5
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All DBs
Position
1:complement(11623606..11641646)
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AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLDCGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNSSEKVIDMELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSVHKTKHDLMMKGEGNRKGSFFKQAKKAYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCVSTTESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAESCRAFGGKDIKVYVPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELRDDGEDT
EMQVETSSSETSTVAQQKAIKSLFGDDDKEICEESEIIPTLEPLPPNEVPGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCEDFYKIRDLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaagctaaccaccctttcaggggtgcaggaggaatcagctctctgt
tatttacttcaagtagatgagtttcgctttctattggattgcggatgggatgaaaatttt
tctatggacatcattgattctttgagaaaacatgttcatcaggttgatgcagtacttctg
tcacatccagatcctttacatttgggtgcacttccatacgcagtaggaaaaatgggtttg
aattgtgctatttatgcaactattccagtgtataaaatgggccagatgttcatgtatgat
ctctaccagtcacggcacaatacagaagacttcacgttgtttaccctggatgatgtggat
gcagctttcgataaaatacaacaactgaaattttctcagattgtcaatttgaaaggtaaa
ggacatggtttgtctatcacaccattaccagcaggccatatgataggaggcaccatttgg
aagatagttaaagatggagaagaagaaatagtttatgcagttgatttcaaccacaagagg
gaaatccatctgaatggatgttccctggaaatgttaagtagaccttccttgcttatcacg
gattcctttaatgctacctatgtacaaccgaggcggaagcaaagagatgaacaactgctg
acaaatgtcttggaaacacttagaggtgatgggaatgtcttaatagctgtggatactgca
ggcagagttttggaacttgcccagctgcttgatcaaatatggaggacaaaagatgccggc
ttaggtgtctactctttagcacttttaaataatgtcagctacaacgttgtggagttttca
aaatcacaggtggaatggatgagtgacaagctgatgagatgctttgaagataagaggaac
aatcctttccagtttcgtcatctctctctgtgtcatggactttcagatttggctcgagtt
cctagtcccaaagttgtccttgccagccaaccagatttggactgtgggttttcaagggat
ctctttatacagtggtgtcaggaccctaaaaactctatcattttgacctatagaacaact
cctgggacactggcacgatttcttatagataactcctctgaaaaggttattgacatggag
ttgaggaaaagggttaaactggaaggaaaggaacttgaagaatacctggagaaagagaaa
cttaaaaaagaagcagctaaaaagttggaacagtcaaaagaagcggatattgattccagt
gatgaaagtgatgcagaagaggatattgatcagccatcggttcataaaactaaacacgac
ctgatgatgaaaggagaaggaaaccggaaaggaagcttcttcaaacaggccaaaaaagca
tatcctatgtttccagctccagaagagagaattaaatgggatgaatatggagaaattatc
aaacctgaagatttccttgttccagaactgcaggcaacagaggaagaaaaaaacaaatta
gaatcagggcttaccaatggagaagaacctatggaccaggatttatccgatgttcctact
aaatgcgtttccacaacagaatcaatggaaataaaagctcgggttacatatatcgattat
gaaggtcggtcagatggagactccattaaaaaaatcattaatcaaatgaagccgcggcaa
ttggtcattgtccatgggccacctgaagccagtcaggatctggcggagtcctgtcgagct
tttggtggaaaggatattaaagtttacgtgcccaaacttcatgaaacagttgatgcaacc
agcgagactcacatataccaggttaggttaaaagattctctcgtcagttcccttcagttt
tgtaaagcgaaagatgctgaactggcatggatagatggagtcttggacatgcgggtatcc
aaagtggacactggggtgattttggaagaaggggaactaagggatgatggcgaagacaca
gaaatgcaagtggagacttcctcttctgaaaccagtactgtagcacagcagaaggccatc
aagagtctctttggagatgacgacaaagaaatatgtgaggagagtgagatcattcctact
ttggagcccttgcctcccaacgaggttcctggccatcaatctgtcttcatgaatgagccc
aggttgtctgactttaagcaggttcttcttcgagaaggaattcaagctgaatttgtagga
ggggtccttgtatgtaataacttagtggctgttcgcaggactgaaacgggtcggattgga
ttggaaggctgtctctgtgaagacttctataaaattagggatcttttatatgaacagtat
gccattgtctga
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