Anolis carolinensis (green anole): 100567437
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Entry
100567437 CDS
T01608
Symbol
ighmbp2
Name
(RefSeq) immunoglobulin mu binding protein 2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acs03009
]
100567437 (ighmbp2)
03012 Translation factors [BR:
acs03012
]
100567437 (ighmbp2)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100567437 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
100567437 (ighmbp2)
Ribosome biogenesis [BR:
acs03009
]
Eukaryotic type
Other ribosome biogenesis factors
100567437 (ighmbp2)
Translation factors [BR:
acs03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100567437 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
ResIII
Helicase_RecD
AAA_16
Viral_helicase1
AAA_22
nSTAND3
DEAD
Flavi_DEAD
SLFN-g3_helicase
DnaB_C
UvrD-helicase
AAA
AAA_25
cobW
PhoH
Zot
ABC_tran
AAA_5
NPHP3_N
DAO_C
AAA_33
Motif
Other DBs
NCBI-GeneID:
100567437
NCBI-ProteinID:
XP_008106994
LinkDB
All DBs
Position
1:76130742..76226962
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AA seq
995 aa
AA seq
DB search
MATAVEPFVSRQLELLQEEREAEIAEARVWQESISLKELERKGVCLLKLEIASQRTGLYG
RFLVTLQPRKCGLQAELPSNSFGPGDIVGLYETAGQGDQLSTGIVTRITAKSVTVAIDEP
QSSLLSLDQGNTYRLLKLANDVTYKRLKRALNTLSQYRSGPASGLIDVLFCASEPSDANN
TRPLKFYNESLDASQKEAVGFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQRLKVLCC
APSNIAVDNLVERLASHKARILRLGHPARLLESIQQHSLDAILAHGDNAQIVADIRKDID
QAFVKNRKTQDKGERSHFLNEIKTLRKELKEREEMAMTEILTHADVILATNTGASSDGPL
KLLPENHFDMVVIDECSQALEASCWIPLLKAKKCVLAGDHKQLPPTIISHKAASKGLSLS
LMERLIEKYGDRVVKMLTVQYRMHQDIMQWASTEMYDGRLLAHHSVAQHLLKDLPGVAST
EETSIPLLLIDTAGCGLFELDVEDEQSKGNQGEVRLVGLHIQALVDAGVKARDIAVITPY
NLQVDMLRELLCQNYPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAI
TRARRHVAVICDSRTTGNHSFLKRLVDYMNEHGEVRTAFEYLDDIVPENYAPKNSQSLSG
QGQKHKCNKAAPKADGEKPQRKPTKQPEQRPTEGLVSNTVRITTAGPEVKERLCKHKAKI
LEFLDSSESQLEFPPSLNAHDRLLIHQLAEEYGLQHLSLGEGKERYISIRRKTTATNPTL
PKTVATHVSLRDVKVCEQELSPKTPSPPREISGHNKERVSSISMGEIDLKTLHMERIERE
KARKKEKAKQSQQQNVNLQEPGKKHKGEAIGKPVVKTRTESAAEEDFDAMISAAVKADNT
CGFSKCKASVTTLGQLCLYCNKRYCLSHHIPEIHGCGEKAKAHARQRISKEGVLYPGSGS
KDKSLDPAKRAHLQRRLDKKLNELTSQRKSKKKEK
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgtggagccgtttgtgtctcggcagctagagctgcttcaggaggagcgg
gaggccgagattgccgaagccagagtatggcaggaaagcatctccttgaaagagctggag
cgcaaaggagtctgcttgctgaaacttgaaatagctagtcaaagaactgggctatatgga
cgtttccttgtaactttacaacctcgaaaatgtggcctgcaagcagagctgcccagtaat
agctttgggcctggtgacattgtgggactctatgaaactgctggacaaggtgatcagctc
tccacaggaatagtcactcgcataactgctaaatcagttactgttgctattgatgagcct
cagagtagccttctgagcctggatcagggaaacacttatcgtttactgaaacttgccaat
gatgtcacatacaaaagacttaaaagggctttaaatacacttagccaatatcgctctggt
ccagcatctggccttattgatgtcctcttctgtgcttctgagcccagtgatgccaataat
acaaggcctctgaagttctacaatgaatcactggatgcctcccagaaggaggctgttggt
ttttccttggcacagaaagagcttgcaatcatccatggaccacctggcactggcaaaacg
acgactgtagttgagataatactccaagctgtgcagcagagattgaaagtcttgtgctgc
gctccatctaacatcgcagtggacaacttggtagaaagacttgcaagccataaagcccgg
attctccgccttggtcatccagctcgtctcttggagtccatacagcaacattcacttgat
gccatcttggcccatggggataatgcccaaattgtggcagatatccgaaaggatattgat
caagcatttgttaagaacagaaaaacccaagacaaaggggaaagaagccattttctgaat
gagatcaagacactgcgaaaggagctaaaagagcgagaggaaatggcaatgactgaaatc
ctgacacatgcagatgttattcttgctacaaacacaggagcctcttctgatggcccactg
aagctgcttccagagaatcactttgacatggtggtgattgatgaatgttctcaagcactt
gaagccagctgctggatacctctgctgaaggccaaaaaatgtgtcctggctggagatcac
aaacagttgcctcccacaataatctcacacaaggctgcctcgaagggcctttctctcagc
ttaatggaaaggttgattgaaaaatatggcgatcgtgttgtcaaaatgctcactgtgcag
taccgaatgcaccaggacataatgcaatgggcttccactgagatgtatgatggccgcctc
ttggctcaccactctgttgcacaacatttgctaaaggacctgccaggagtggcttcaacg
gaagagactagtattcctttgcttctgatcgatacagctggttgcggcttatttgagctt
gatgtggaagatgaacagtcaaaaggaaaccaaggtgaagtgcgtcttgttggtttacac
atacaggctttggtagatgctggtgttaaggcaagagacatagctgtcattactccttat
aacctccaggtggacatgctaagagagcttctctgtcagaattatccagagctggaaatt
aaatctgtagatggtttccaaggaagagagaaggaggctgtggtcctttcttttgtgaga
tccaataggaaaggtgaagtgggatttcttgctgaagaccggagaataaatgttgcaata
acccgtgcccgacgccatgtagctgtgatctgtgactcccgaaccactggaaaccacagt
tttcttaaacggctggttgattacatgaatgaacatggggaagtacgcacagcctttgaa
tatctggatgacattgtgccagaaaactatgcacccaaaaactctcagagtctcagtggc
caaggacagaagcataaatgcaacaaagcagccccaaaagctgatggggagaaaccacaa
agaaaaccaaccaaacaacctgagcagagaccaacagagggtttggtgtcaaacacagtc
aggatcacaactgcaggtcctgaagtaaaggagcgtttgtgtaaacataaagcaaagata
ttggaatttctggacagtagtgagtcacagctggagtttcctccatcattaaatgctcac
gacaggctgcttatccaccagttggcagaggaatatgggttgcaacatttaagtttgggt
gaaggaaaagagagatacattagcattcgaaggaaaactactgccacaaatcccactttg
cctaaaactgttgcaacacatgtatctctgagagatgtgaaggtatgtgaacaagagtta
tcccctaagacacccagccctccaagggaaatttctggtcacaacaaggagagagtaagc
agcattagcatgggagaaatagatctgaaaacattgcacatggaaaggatagaaagggaa
aaggccaggaaaaaggaaaaagcaaaacaaagtcagcaacagaatgtaaacctgcaagaa
cctgggaagaaacacaaaggtgaagccatagggaagcctgttgttaaaaccagaacagaa
agtgcagctgaggaagattttgatgctatgatttctgctgcagttaaagctgacaataca
tgtggtttctccaagtgcaaagcaagtgtaacaactctgggacagctgtgtctgtattgc
aataaacgctattgtctcagccaccacatcccagagattcatgggtgtggagagaaggcc
aaagcacatgcccggcagagaatcagcaaggaaggtgttctgtatcctgggagcggatcg
aaagacaagtccttggatcccgccaagcgagctcacctccagaggcgcctggacaaaaaa
ctaaatgaattgactagccagaggaaaagcaaaaagaaagagaaatga
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