Anolis carolinensis (green anole): 100567525
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Entry
100567525 CDS
T01608
Symbol
pkd2
Name
(RefSeq) polycystin 2, transient receptor potential cation channel
KO
K04986
polycystin 2
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acs03037
]
100567525 (pkd2)
04040 Ion channels [BR:
acs04040
]
100567525 (pkd2)
Cilium and associated proteins [BR:
acs03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100567525 (pkd2)
Ion channels [BR:
acs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100567525 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
100567525
NCBI-ProteinID:
XP_016849278
Ensembl:
ENSACAG00000012695
LinkDB
All DBs
Position
5:45599353..45616234
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AA seq
872 aa
AA seq
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MAGGLEQLELGQLRESPSSPSSSPLSSCSRQAWSRDNPGFEAEAEEDGAKAAGKGPVLQM
EPSQLPQESGEAAESPLPSPPPPPSPPPRRLAWAKGWARRLRGLWGTRLMEETTTREKYL
KSVLRELITYLMFLLVLSILSYGMVSSNMYYYTKAMSQVFLDTPISKMEKINFKTLSTME
DFWKFTEGPLLDGLYWDMWYNNKTVTENRSFIYHENLLLGIPRMRQLKVRNGSCLIPEDL
QDEIKDCYSVYSVGNEDTAPFGLRNGTAWTYSSEKDLHGSSYWGLIATYSGGGYYQDLSK
SREKTSDLIAGLKNNLWLDRGTRATFIDFSVYNANINLFCIVRLLVEFPPTGGLLTSWQF
QPVKLIHYISTFDFFLAACEIIFCLFIIYYVVEEILEIHIHRLFYFRSLWNCLDVLIILL
SVAAIGINIYQTSAVDRMLKELLENQNSFPNFESLSYWQTQFNSIAAITMFFVWMKLFKF
INFNRTMSQLSSTMSRCAKDVLGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFPDSIFTQ
FRILLGDFDFTEVEETNRILGPVYFTTFVFFMFFILLNMFLAIINDTYSEVKSDMAQQKS
EMELSDLIKKEYTKAMVKLKLKKTPVDDISESLRQSGGKLNFDELRQNLKGKGHTDAEIE
AIFTKYDQDGDQELTELEHQQMRDDLEKERDLDLDRSSLNRPLSGRSFPRSLDDSEEDDD
DDSGHSSRRRGSSSSGVSYEEFQVLVRRVDRMEHSIGSIVSKVDAVIMKLEIMEKAKLKR
KEVLGRLLDGVTEDERLGRENEMHRDQMERLVREELERWESDDAASQVSHRLGTPMGLNG
QSRARSSRPSSSQSTEGAEGGGAGNGGSNVNV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgggctggagcagctggagctggggcagctccgcgagtctccctcctcgccc
tcgtcctcgccgctctcctcctgctcgaggcaggcctggagccgcgacaacccgggcttc
gaggccgaggcggaggaggacggggccaaggcggcgggcaaagggcccgtgctgcaaatg
gagccctcgcagctccctcaggaaagcggggaggccgcagagagcccccttccttctcct
ccgcctccgccttctcctcctccgcgccgcctggcctgggccaagggatgggccaggcgc
ctcaggggtctatggggtacaagattaatggaagaaaccacaaccagagaaaaatacctg
aaaagtgttttgcgagaattaatcacgtatttgatgtttctcctggttctttctatcttg
tcttatgggatggtgagctctaatatgtactactacacaaaggcaatgtcacaggtcttt
ctagacacacctatatcaaaaatggagaagatcaacttcaaaactttgtccacaatggaa
gacttctggaagttcactgagggtcctttgcttgatggattgtattgggacatgtggtac
aacaataaaacagtgacagagaatagaagtttcatttaccacgagaacctgcttttggga
atccctcggatgcggcagctgaaagtgagaaatggctcatgtttaatacctgaagattta
caggatgaaatcaaagactgttacagtgtttactctgtaggtaatgaggacactgctcca
tttgggctccgcaatggaactgcttggacatactccagtgaaaaagatctacatgggagc
agctattgggggctcattgcaacgtacagcggaggtggctattaccaggatctttctaaa
agcagagaaaagacctctgacttgattgctggccttaagaacaacttgtggcttgacagg
ggcacaagggcaacatttattgatttttctgtatacaatgccaatatcaatctcttctgt
attgtcaggttattagtggagttcccaccaacaggaggcctccttacgtcttggcagttc
cagccagtgaagttgatacactacatctctacctttgacttcttcttagctgcctgtgaa
ataattttttgtctttttattatttattacgtggtagaagaaatcctagaaattcatatt
cacagactattctatttcagaagtctttggaattgtcttgacgttctcattattctgcta
tcagtcgcagctatcggaattaatatatatcaaacatctgctgtggataggatgctgaag
gagctcctggaaaatcaaaatagcttcccaaattttgaatctttatcatactggcaaaca
cagttcaacagtattgcagccatcaccatgttttttgtctggatgaagctttttaaattc
atcaacttcaaccggacaatgagccagttatcttccacaatgtcacgatgtgccaaagat
gtccttggttttgctattatgtttttcatcatttttttagcctatgcacagctagcctac
ctagtatttggcacacaagttgatgacttcagtaccttcccggatagtatctttacacag
ttccgcatcctgttgggagattttgactttacagaggttgaagagaccaacagaattttg
ggaccagtttatttcactacatttgtattctttatgttcttcattcttttgaacatgttt
ttggctattatcaatgatacatactcagaggtcaagtcggatatggcacaacagaagtct
gaaatggaattgtcagatcttattaaaaaggaatacactaaagccatggtgaaattaaaa
ttgaagaaaacaccagttgatgacatttcagagagtttacggcaaagtggaggcaaatta
aactttgatgaactacggcagaaccttaagggaaaaggacatactgatgctgagattgaa
gctatctttacaaagtatgatcaagatggtgatcaggaattgactgagctggagcatcaa
cagatgagagatgatttggagaaagagcgagacttggatctagacagaagctctctgaac
cgtccactgagtggccgtagttttccacgaagccttgatgattctgaagaggatgatgac
gatgacagcgggcacagctctaggaggagaggcagcagctcaagtggagtatcatatgaa
gagtttcaagtattggttcgtcgtgtggatcgcatggaacattccataggcagcattgtt
tcaaaggtcgatgctgtcattatgaagctggaaattatggagaaagcaaaactcaagagg
aaggaggtcttgggaaggctgctggatggggtcacagaggatgaaagattgggccgtgaa
aatgagatgcacagagatcagatggagagacttgtgcgagaagaactggagcgctgggaa
tcggacgatgccgcttctcaagtgagccaccgcttggggaccccaatggggctcaatggc
caaagccgggcaaggagctcccgcccttcttcctcccagtccacagaaggcgctgagggc
gggggggccgggaatggcgggagcaacgtaaatgtctag
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