Anolis carolinensis (green anole): 100567964
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Entry
100567964 CDS
T01608
Symbol
xab2
Name
(RefSeq) XPA binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100567964 (xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100567964 (xab2)
03041 Spliceosome [BR:
acs03041
]
100567964 (xab2)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100567964 (xab2)
Spliceosome [BR:
acs03041
]
Complex B
Other components
Prp19-related factors
100567964 (xab2)
Complex C
100567964 (xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_12
TPR_8
ARM_TT21_C
TPR_15
ARM_TT21
NRDE-2
TPR_1
CKAP2_C
LTN1_E3_ligase_6th
TPR_16
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
100567964
NCBI-ProteinID:
XP_003217110
Ensembl:
ENSACAG00000017173
UniProt:
G1KTM1
LinkDB
All DBs
Position
2:103064907..103084948
Genome browser
AA seq
922 aa
AA seq
DB search
MAGGTNMAAVGELRRTRPPLAGGQLDRGGRRAAKPKGEGEGEAEESWKVDGQYLDVIFAR
RVWTEQEEAAMPELETVLGKRDLFFEEEDLQYEEEILRNPFSVKCWIRYIEFKQNAPKHI
LNLIYERALKELPGSYKLWYNYLKQRRKQVKSRCVTDPSYEEVNNCHERALVFMHKMPRI
WLDYCQFLMDQCRITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRY
LKLSPENAEEYIEYLRSIDRLDEAAVRLAAIVNDERFVSKEGKSNYQLWHELCDLISQNP
DKVKSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDF
TQVFDSYAQFEESMIAAKMETTSEMGREEEDDVDLELRLARFEQLITRRPLLLNSVLLRQ
NPHNVHEWHKRVKLYEGKPREIINTYTEAVQTVDPFKATGKTHTLWVSFAKFYEVNGQIE
DARTIFEKATKVNYKQVDELASVWCEYGEMELRHENYDQALRILRKATAIPAKKAEYFDS
SEPVQNRVYKSLKVWSMLADLEESLGTFKSTKAVYDRILDLRIATPQIIINYGLFLEEHN
YFEESFKAYERGISLFKWPNVYDIWNTYLTKFIDRYAGKKLERARDLFEQALDGCPQKYA
KTIYLLYAKLEEEYGLARHAMAVYERATQAVQPSEQYDMYNIYIKRAAEIYGVTHTRSIY
EKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSYCSQISDPRTTTNFWQTWKEFEI
RHGNEDTIREMLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGMDDMKLL
EQRAEQLAAEAERDQPRAKEKILFVRSDASRSELAELTKQANPDEIDIDLDDGDESEDNE
PDEVQLEQQSVPSAVFGGLKDD
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgggactaacatggcggccgtaggagagctgcgaagaacacgccctccactc
gctggcggccaattggatcgggggggacgccgcgcggccaaaccgaagggggagggggag
ggggaggcagaggagagctggaaggttgacggccaatacctcgacgtcatttttgcgcgc
cgtgtttggaccgagcaggaagaggctgcgatgccggagctggagaccgtgctggggaag
cgggatcttttcttcgaggaggaagacctgcagtatgaggaggaaatcttgcgtaatcct
ttctctgtcaaatgctggatccgctacattgaattcaagcagaatgctcccaagcatatc
ctgaatctgatttatgagagagctcttaaagaattgccagggagctacaagctatggtat
aattatcttaagcagcgacggaaacaggtgaagagcaggtgtgtaacagacccgagctat
gaagaggtgaacaattgtcacgaacgcgccctggtcttcatgcacaagatgcctcgcata
tggctcgattactgccagttcctcatggaccaatgtcggatcactcgtacacgcaggacc
tttgaccgggcactcagggccctacccatcacacagcaccatcgtatctggccactttac
ctgaaatttgtgcgcttgtatccattacctgaaacagctgtacgagtctaccgcagatac
ttgaagctaagtccagagaatgctgaagaatatattgagtatctgcgttccattgatcgc
ctagatgaggctgctgtccgtcttgctgccattgtgaatgatgaacgctttgtttccaag
gagggcaaatccaattatcagctatggcatgagctctgtgacctcatctcacagaatcca
gataaagtgaaatctcttaatgtgggagccatcatccgaggtggtctgactcgtttcact
gaccagctgggcaagctgtggtgttccctggctgactactacattcgcagtgggcatttt
gagaaggctcgtgatgtgtatgaagaagctattcagacagtgatgacggtgcgggatttc
actcaagtttttgacagctatgcccagtttgaagagagtatgatcgctgcaaagatggag
accacatcagagatggggcgtgaggaagaggatgatgtcgacctggaactgcgcctggca
cgctttgagcagcttatcacacgtcggcctctgcttctcaacagtgtcctcctgcgccag
aaccctcacaatgtgcatgagtggcacaagcgagtgaagctatatgaaggcaaacctcgt
gagatcatcaacacgtacacagaagcagtgcagaccgttgacccgtttaaagccactggg
aagacacacacgctgtgggtttcttttgccaagttctatgaggtcaatggacagatagaa
gatgccagaaccatctttgaaaaggccaccaaggtgaattacaagcaagtagacgaactt
gccagtgtgtggtgtgaatatggagagatggagttgcggcatgagaactatgaccaagcg
ctgcgtatcctacggaaagctacagccatcccagctaagaaagcagagtattttgattcc
tcagaacctgtgcagaaccgtgtatacaagtccctcaaagtttggtccatgttggctgac
ttggaagaaagtctgggcactttcaaatctactaaagctgtgtatgatcgcattctggac
ctccgcattgccactccccaaatcatcatcaactatggcctcttcctggaagagcacaac
tactttgaggagagcttcaaggcatacgagagaggcatttcactcttcaagtggccaaat
gtgtatgacatatggaatacctacctaactaaattcatcgaccgctatgctggcaagaag
ctggagcgtgctcgggacctctttgaacaggcattggatggctgtccccagaaatatgct
aaaactatctatctcctgtatgcaaagctggaggaggaatatggcttggcccgccatgct
atggcagtgtatgagcgggccactcaggctgtgcaaccttcagagcagtatgacatgtac
aatatctacatcaagagagccgctgaaatctatggtgtcacacacacccgcagcatctat
gagaaggcaattgaggtgctgtcagatgaacacgcccgggagatgtgcctgcgttttgct
gatatggagtgcaagctgggtgaaatcgatcgggctcgggccatttattcctactgttca
cagatttctgatccccgtaccactaccaacttctggcagacatggaaggaatttgagatc
cgacatgggaatgaagacactattcgagagatgctgcgcatcaaacgaagcgtgcaggcg
acctacaatactcaagtcaacttcatggcctctcaaatgcttaaagtttacagcaatgcc
acaggcacagtgtctgacttggcacctggacagagtggcatggatgacatgaagctctta
gagcagcgggcagagcagctggcagctgaagcagaaagagatcagccccgagcgaaggag
aaaatcctgtttgtcaggagcgatgcttcccgcagtgaattggctgaactcaccaaacag
gctaaccctgatgaaattgacattgacttggatgatggagatgagagtgaagacaatgag
cctgatgaggttcagctggagcagcaaagtgtcccttctgctgtctttggaggccttaag
gatgactaa
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