Anolis carolinensis (green anole): 103279065
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Entry
103279065 CDS
T01608
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103279065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
103279065
Spliceosome [BR:
acs03041
]
Complex C
Other components
Step II factors
103279065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
WD_LRWD1
Beta-prop_DCAF12
PQQ_2
Motif
Other DBs
NCBI-GeneID:
103279065
NCBI-ProteinID:
XP_008110392
Ensembl:
ENSACAG00000025994
LinkDB
All DBs
Position
5:complement(150166399..150173717)
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AA seq
246 aa
AA seq
DB search
MDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGNQFLSAAYDRYLKLWDTETGQCIS
RFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDVRSGEIVQEYDRHLGAVNTIVFVD
ENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF
GAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMRYVSIIRLLNIDIPPRLIYNLFCFGHEC
NWKLFF
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggactgtaaaattaagctctgggaggtgtatggtgaacgaagatgcttacgaactttc
attggacacagcaaagctgtgagagatatctgttttaacaatgctgggaaccagtttctc
agtgctgcgtatgaccggtatcttaaactctgggacactgaaacaggtcagtgtatttca
agattcactaacagaaaagtcccttactgtgtcaaattcaatcctgatgaagataagcag
aatctttttgtagcagggatgtctgataagaaaattgtacagtgggatgttcgaagtggt
gaaatcgttcaggagtatgacaggcacttgggtgctgtcaacactattgtatttgtggat
gagaacaggcggtttgtgagcacatcagatgacaagagtttgagagtctgggaatgggac
attccagtagatttcaaatacatagcagagccaagtatgcactcgatgcctgcagtgact
ttgtccccaaatggaaagtggttggcttgtcagtccatggataatcagattttgattttt
ggagcacaaaacagattcaggttgaataaaaagaaaatcttcaaaggtcatatggtggct
ggttatgcttgtcaagtagatttttcacctgacatgaggtatgtttctataattcgtctg
cttaatatagatattcctcccaggttgatttacaatttattttgttttggacatgaatgt
aattggaaactatttttttaa
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integrated database retrieval system
