Anolis carolinensis (green anole): 103281603
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Entry
103281603 CDS
T01608
Symbol
brip1
Name
(RefSeq) BRCA1 interacting protein C-terminal helicase 1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03440
Homologous recombination
acs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103281603 (brip1)
03460 Fanconi anemia pathway
103281603 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acs03400
]
103281603 (brip1)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103281603 (brip1)
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103281603 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
103281603 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
103281603
NCBI-ProteinID:
XP_008121726
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Position
Un
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AA seq
1207 aa
AA seq
DB search
MASSASEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNSKQHCLLESPTGSGKSLALLCSA
LSWQQAQYDKPLDNMSGSKESKKPEPLMPCRCGCHTSRTTQSPDGAKQDQAASDAFTNGA
PAMPTSSGNTSRNEDSVLFPFDGKHTAKTTLASKLFAKKQASLQEGEDDDFKVDRKRIRS
LETEEQARKRHRLAKGVQFVDALEIYQQHKNGELIVSSGKTTPSSLKTLPGPCHQCSCSS
AEEKGRDTADAKKKDNGERPAIPKIYFGTRTHKQIAQITRELRRTAYAGVQMTILSSRDH
SCVHPTVSTCGNKNEKCAELLEAKHGTSCSFFHGVHKLRDHHVFQFAQRKYQAWDIEDLV
RLGKKLRACAFFAARELMATADIVFCPYNYLLDPQIRESMEINLKDQVVILDEAHNIEES
ARESASYSVTEAQLQMAREELDAMVNNNIRKQDHEPLRAVCYSLTNWLRKACAELVERDY
ETSSKVWSGSQMVTFFHTMGITNASLPFLQRHLAAVLEKEEKVPLFHGGEEVVSVPVISP
PTQIVLKGLFMVLQFLFRENHRFADDYRVALQQTYAWTNETPADAPDAKGFFARPKRRSR
HKVAVHNLNFWCLNPAVAFSDLSGNVRSIVLTSGTLSPMDSFSSELGVKFSIQLEANHVI
HNSQVWVGTIGAGPKGRTLRATFQHTETFEFQDEVGELLLSVCQTISRGVLCFLSSYKML
DKLKDRWLHTALWEKLELIKTVIVEPKGGDKANFDELLQVYYDAIKCQEGKDGALLIAVC
RGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRKYNDQHSKARGLLSGSQWYEIQA
YRALNQALGRCIRHRSDWGALILVDDRFGRHPSKYIAGLSKWIRQQIQHHENFDHALGSL
ETFAKSNQKRTGPSLEANGNYSLVPSALKDLSRSSGPDPETLFAADINPTTYNIPPEEKH
PHPSHQMRDPTPRNPTRENKREKSNRQLTSGSIKQYFGATSTSTPPPATNVERMPKTKLL
MDEMNQLVSIVSQQDVVLVEVDEPIGLETETVNCSSGKAIQEYPIPWQSCDHENSENADV
SVTRGNVEPSTSAAETGVGDDSVYFTPELYESAEEEQEWLATPCGDAGIANTFLTEFLNP
VEEEAGVKTGTGWEGESNEDTIRVAGESPRTGDIAQEGKTRKSRLSRTQKKGLKVQRTYK
RRIRKNI
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcagcctcagaatacactattggcggcgtgaagattctctttccttgcaag
gcgtatccttcccagctggccatgatgaacgcgattgtaaaagggctaaactccaagcaa
cattgcctcttggagagtccgacgggaagcgggaaaagcttggccttgctctgctcagct
ttgtcatggcaacaagcacaatacgacaagcccctggacaacatgtcaggttcaaaggaa
tccaagaagccagagcccttgatgccatgccgttgtggttgccacactagccgcacaact
cagagcccggatggggcgaagcaggaccaagcggcctctgatgccttcaccaacggtgcc
cccgccatgcccaccagcagtggaaatacgtccagaaacgaagactctgttttgttccct
tttgatggaaagcacacagcgaaaaccacacttgcttccaagctatttgcaaagaaacag
gcttctttgcaggaaggggaagatgatgattttaaagttgataggaagcggattcgttca
ctagaaactgaagagcaggctagaaaacgacaccgactggctaaaggggtccagtttgtc
gatgccttggaaatttatcagcagcataaaaatggggaattgattgtgtcttctgggaaa
actacgccttcctctctcaaaacacttcctggcccttgccaccagtgttcctgttcttct
gcggaggaaaaaggcagagacacagccgatgcgaagaagaaagacaacggagagcggccg
gctattcccaaaatatattttggaacccggacccacaaacagattgctcagatcacgcga
gagctgcggaggacggcatatgccggtgtccagatgaccatcctttctagccgggaccac
agctgcgtccacccaaccgtctcgacttgcggaaacaagaacgaaaaatgcgcagagttg
ttggaagccaaacacggtacatcttgttcttttttccatggagtccataagctgcgcgat
caccacgtctttcagtttgcccaaaggaaataccaagcctgggacatagaagatctagtg
cggctgggaaagaagctccgggcttgtgctttttttgctgctcgggaacttatggcgaca
gcagacattgtcttttgtccttacaactaccttttagacccacaaataagagagagtatg
gaaattaatttgaaggaccaggtggtcattttggatgaagctcacaacattgaggagagt
gcccgcgagtccgccagctacagcgtgaccgaagctcagctccaaatggccagagaagag
ctggacgccatggtcaacaacaacatccggaaacaggaccacgagcctttgcgggcagtg
tgctacagcctcacaaactggttaaggaaagcatgtgctgagctggtagagcgagattat
gagacatccagtaaagtctggagtgggagtcaaatggtgacattcttccacacaatggga
ataacaaatgcttcccttcccttcttgcagcgacatttagctgctgttcttgaaaaagaa
gaaaaagtccctcttttccacggcggagaagaagtcgtttctgttccggtgatcagccct
ccgactcagattgtgctcaaaggcctcttcatggtgttgcagtttcttttccgagagaac
caccggtttgccgatgactacagagttgctttgcagcaaacctacgcctggacaaacgag
actccggcggacgctccggatgcaaaagggttttttgcacgaccgaaaaggaggtcgcgg
cacaaagtggccgtgcataatctcaatttctggtgcttgaatccagctgtggccttctct
gacttgagcggaaatgtgagatccattgtgttaacctccgggacgctttctccaatggat
tccttctcttctgagcttggtgtgaagttttccattcagcttgaagcaaaccatgtcatt
cacaactcacaggtatgggtcggtaccatcggagccggtcccaaaggcaggactttacgc
gccactttccagcacacagaaacctttgaattccaggacgaagtgggagagctcctgctt
tcggtctgccagaccatcagccgcggggttttatgcttcttgtcatcatataagatgttg
gataagctgaaagatcgctggctgcacacggccttatgggagaagcttgagctgatcaag
accgtgattgtggagcccaaaggaggagacaaggccaacttcgatgagctgctccaagtc
tactacgatgccatcaagtgtcaagaagggaaggatggtgcccttcttatcgctgtctgt
cgaggcaaagtcagcgaaggcctggatttctccgatgacaacgcccgagcagttataacg
ataggaattcccttcccaaatgtgaaggaccttcaggttgagctgaagaggaaatacaat
gaccagcattcgaaggcaagaggacttctgtctgggagccagtggtatgaaatccaggcc
tatcgggctcttaaccaagcccttggcaggtgtattcgccataggagtgactggggagcc
ctcattttagtcgatgaccgcttcggaaggcacccaagtaaatatatagctggattatca
aaatggattcgccagcaaatccagcaccatgagaactttgatcacgctcttggctccttg
gagacatttgcgaaatcgaaccagaagcgaaccggcccttctctcgaggccaacgggaat
tactcactcgtgccttctgctctaaaagatctgtcacgcagctcaggaccggatccggaa
acactttttgcagccgatattaatccaacaacatacaacatacctcccgaggaaaaacat
cctcacccatctcaccagatgagagaccccacacccagaaatcccaccagagaaaacaag
agggaaaaatcaaatcgtcagctcacctccggaagtataaaacagtatttcggtgcaacg
tcaacatccacgcctccgcctgcaacgaatgtggagcgtatgcccaaaaccaaattgctg
atggacgagatgaaccaacttgtttcaattgtttcccagcaagatgtagtcttggttgag
gtcgatgagccaattggattggagacagaaacggttaactgttcttctggaaaagcgatt
caagaatatcccataccatggcaatcctgcgaccacgaaaacagcgagaatgcggacgtt
tctgtaacaagaggaaacgtggaaccttcgacatcggctgcagaaacaggtgtcggtgac
gacagtgtctacttcacacccgaactttacgagtccgcggaagaagaacaggaatggctt
gctaccccatgtggcgacgccgggatagcaaacacttttttgaccgaatttctgaacccg
gtagaggaagaagctggcgttaaaacgggcacagggtgggaaggtgagagtaacgaagat
acaatccgagtagccggagagagtcctaggacaggagacattgcgcaggaaggaaagacg
aggaaaagcagactttctcgaacacagaagaaagggttgaaagtgcaaagaacctataaa
cgaagaatcaggaagaacatctag
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