Ananas comosus (pineapple): 109722720
Help
Entry
109722720 CDS
T12126
Symbol
LOC109722720
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
acss
Ananas comosus (pineapple)
Pathway
acss03030
DNA replication
acss03410
Base excision repair
acss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109722720 (LOC109722720)
03410 Base excision repair
109722720 (LOC109722720)
03420 Nucleotide excision repair
109722720 (LOC109722720)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acss03032
]
109722720 (LOC109722720)
03400 DNA repair and recombination proteins [BR:
acss03400
]
109722720 (LOC109722720)
Enzymes [BR:
acss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109722720 (LOC109722720)
DNA replication proteins [BR:
acss03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
109722720 (LOC109722720)
DNA repair and recombination proteins [BR:
acss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
109722720 (LOC109722720)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
109722720
NCBI-ProteinID:
XP_020106425
UniProt:
A0A6P5GM59
LinkDB
All DBs
Position
LG17:complement(4476414..4505397)
Genome browser
AA seq
2198 aa
AA seq
DB search
MNGEGRRRERFGAARNASSKQKIRLGAEEVIESKLGFALFTEGERRLGWLLTLAPSSWED
QDTGKIYSCVDLYFVSQDGSTFKVKYKFRPYFYAASKDNTELEVEAYLRRRYEGRITDIE
IAEKEDLDLKNHLSGLHRQYLKIQFDTVQQLIYVRNELLHVVERNQAKLDAAEAFESIYN
VKSRERPQDYFDCIVDLREYDVPYHVRFAIDNDIRCGKWYDVGVSSSGILLDERDDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDLIMMISYMIDGQGFLIINRECVGEDIEDLEYTPKP
EYEGYFKVKNVKNEEELLKAWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAAHHGIKMSEE
IGFQHDSNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYNPLEVNPEDMV
RFAMEQPQKMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVQAYQANVICPNKHQADPEKFYNNRLLESETYIGGHVECLETGVFRSDLPTKFQLDPSA
YEQLISNLDRDLQYAITVEGKMDVDSILNYEDVKNAILDKLMLLRDHPTREEHPLIYHLD
VAAMYPNIILTNRLQPPSIVTDVVCTACDFNRPGKNCLRKLEWVWRGETYMGKKSDYYHI
KKQIESELVDSGNSESLKPFLDLSKSDQQLKLKERLKKYCQKAYKRVLDKPITELREAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLAEAKASGNSIKIQEAQDMVVLYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWC
ALPGSFPENFTFKTKDGYRKLTISYPCVMLNVDVARNNTNDQYQTLKDPVNKIYTTHSEC
SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLAELKGFEIKRRGELKLIKVFQA
EVFDKFLHGSTLEECYAAVASVANCWLDLLDNQGIDIADGELLDYISESSTMSKSLVDYG
EQKSCAVTTARRLADFLGDAMVKDKGLHCQYIVAREPQGTPVSERAVPVAIFETDAEIAK
HYLRKWCKISSDAGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVAHPDWLHK
KVREKEDRFRQRKLVDIFSILSKDAAMQNEKDLGDVEDLVTSKAPSRKGHRPIVHSYEIN
KENYPTKQSFMGAEQQQNGAACRSNEPLMSLKKSNASAEVIDRNIDYQGWLDVKKRKWRE
TREQKKRRRIGFGDSKLSASMFNRTHDKGRNRFTSFFKSHELALVRSHWQIIQIVATQQP
GLFFAWVVADGLMVKVPMNVPRVFYLNTRAPITEEFPGRRVKKILPHRKPCYNLIEVVIN
EDQFRAESKKLAAHLADPEVEGIYETKISLEFNAILQIGCVCKVKKTAKVRNVHDVWNLT
ELQMKTTAEYSYLEHAISFFYLYHSSSDGRAIYVLYFPVTLTIYAVVINPFQNKELSSAL
LEKQFREACQMMSLEPPQRGNATFKVEYFRLNDAGIKFLQKTLTDYRHQHPGPAIGVIEC
PNIQVITSAIRALDDFPYVGIPCNTRDSNYQALGWQVTAGKTSMQRCAASSQWFNERIML
SRYAHVPLGNFELDWLLYTADVFFSRALRDQQQILWISDDGIPDIGGIYQGDTCFADEVN
QPALTYPGAYRRVAVELKIHHLAVNALLKSSQVDELEGGTLFGYDHDTPHATETDFDNAS
SCAPAFQVLKQLIQRCISDAVTSGNVFADAILQHLYRWLCSPLSKLHDPSLHQVLYNVMR
KVFALLLAELRKLGATIIFASFSRIIIDTGKIDLPAAHAYCDCLLKTLQTRDLFEWIELE
PLHYWHALLFMDQYNYGGIQAKTPTGPADNVADRSQVDIVSSWNIAEYLPKATQDHFVLI
VSEFLYIPWKFLDEQVAARTTLIDGSSCTPSITVTAAETLEASVTGYLKDQISNYFTEKL
LRIVCDILHHFKGKNKMEGDETSNPGSSKPLDSQVHKGDAALEFIKHVCAVLALDQNVQH
DILRMRKNLLKLVRVKEFAPEAQFRDPCPSFTLPNVICSYCNDCRDLDLCRDPTLLDQEW
RCAVPQCGQPYDREQMENTLLQIVRQRERLYHLQDLVCVRCRQVKAAHLADQCVCGGSFR
CTEDAFEFLNKMRVFLNVANHQGFRLLQDCTSWILEVR
NT seq
6597 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgaggggaggcggagggagaggttcggcgccgcgaggaacgcatcgtcgaag
cagaagattcgcctcggcgcggaggaggtcatcgagagcaagctagggttcgccctcttc
accgagggcgagagaaggctcgggtggttgctaacgctagctccgtcgtcttgggaagat
caggacactgggaagatctacagctgcgtcgatctttactttgtttcccaggatggatcc
acattcaaagtgaagtacaagttccgaccttacttttatgctgcctcgaaggacaatacg
gagttggaagtcgaggcatatctcagacggcggtatgaaggaagaataactgatatagag
atcgcggagaaggaggatctggatttaaaaaaccatctctctggtttgcatagacaatat
ctaaagatccagtttgacactgtccaacaattgatatatgtaaggaatgaactactgcat
gttgtcgaaaggaaccaagcaaagttggatgctgcagaagcatttgaatccatttacaat
gtaaaaagcagagaaaggccacaagattattttgattgtatagttgatctgcgtgaatat
gatgttccctaccatgtccgctttgctattgataatgacattagatgcgggaagtggtat
gatgttggtgtatctagttcgggtattttgcttgacgaaagggacgatcttcttcaacgt
gcagaagttcatgtttgtgcatttgatattgaaacaaccaaactaccactgaagtttcca
gatgctgagtatgatctgataatgatgatatcatacatgattgatgggcaagggttcttg
ataatcaacagagagtgtgtaggggaagatatcgaggatttggaatatacccctaaacca
gaatatgaggggtactttaaagttaagaatgtgaaaaatgaggaagagctacttaaagca
tggttttcccacatgcaagaggtgaagcctggtatctatgttacctacaatggtgatttc
tttgattggccgttcttggagaaacgagctgctcatcacggaattaagatgagtgaggaa
ataggtttccagcatgacagcaatcaaggagaatgccgtgctaaattttcttgccatctt
gattgttttgcttgggtcaaacgtgacagttatcttcctcaagggagccatggcctaaag
gctgttacaaaggctaagttgggttacaatccattggaggtgaatcctgaagacatggtc
cgctttgccatggaacagcctcagaaaatggcttcttattctgtatcagatgctgtagca
acgtactacctatacatgacatatgttcatccatttattttctctcttgcaactataata
cctatgccgccggatgaggtcttgaggaaaggaagtggaacactttgtgaaatgcttctc
atggtccaggcgtatcaggcaaatgttatttgtcctaacaagcaccaagctgatccggag
aagttctataacaaccggcttttagaaagtgagacatatattgggggccatgtagaatgt
cttgaaactggcgtctttagatctgatcttcctacaaaatttcaactcgatccatctgca
tacgagcaactgatcagcaatcttgatcgtgatttgcaatatgcaataacagtagagggg
aaaatggatgttgattctatcttgaactatgaggatgtgaagaatgccatattagataag
ctcatgttattgcgggatcatccaacaagggaggagcaccctctcatttatcatctagat
gttgctgctatgtatccaaacattattttaacgaacagactacagccaccatcaattgtt
acagacgtcgtctgtactgcttgcgattttaaccgtccaggaaagaattgccttagaaag
cttgaatgggtttggaggggggagacatacatgggaaaaaagagtgattattatcacata
aagaaacaaattgagtcagagctagtagacagtggtaacagtgagtccttgaagcccttt
cttgacctctcaaaatcagaccaacagttgaagttgaaggaacggttaaaaaagtactgc
cagaaggcatataaaagggttcttgacaagccaatcacagaacttagagaggctggaata
tgcatgcgtgaaaatcctttctatgtggacacagtccgaagtttccgggacaggaggtat
gagtacaaaggtcttaataaggtatggaagggaaaattagcagaggcaaaagcaagtgga
aattctataaagattcaggaagcacaggatatggttgttctctatgattctctacagctt
gctcacaaatgcatcttgaattccttctatggatacgtcatgcgcaagggtgcaagatgg
tattcaatggaaatggctggggttgtaacctatacgggtgcgaagataatacaaaatgca
cgtttactcgttgagaagattggaaggccacttgaactagatacagatggcatctggtgt
gctcttcctggttcttttcctgagaattttacctttaaaacaaaagatggatatagaaaa
ctcaccatctcatatccatgtgtaatgcttaatgtcgatgtggcaaggaacaacactaat
gaccagtaccagacacttaaagatccagttaataagatttacactacacacagtgaatgc
tccatagaatttgaagttgatgggccatacaaggcaatgatactcccagcttcaaaggaa
gaaggaattttaattaagaagaggtatgctgtttttaatgaagatggcaccctcgcagag
ctcaaaggctttgagatcaaacgtagaggtgagctgaagcttataaaggttttccaggca
gaggtttttgacaaatttctccatgggtcgaccttagaggaatgctatgcggctgtggca
tctgttgcaaactgctggctagatcttttggataatcaaggaattgatatcgccgatggt
gagttgcttgattacatctcagaatcaagcacaatgagtaagtctttagttgattatgga
gagcaaaagtcatgtgctgtaaccacagcaaggaggcttgctgattttcttggggatgct
atggtgaaagacaaaggactgcattgccaatatattgttgctcgagagccacagggcact
ccagtaagcgaacgtgctgtccctgttgccatatttgaaacagatgctgaaattgcaaag
cactatctacgaaaatggtgcaaaatttcatcagatgcaggcattcgatctataattgat
tggtcctattacaagcagcgtcttagttcagctattcagaagatcatcacaattcctgct
gcaatgcagaaggtttctaaccctgttcctagagtggcccatcctgattggctgcacaag
aaggtccgtgagaaagaggaccgatttcggcagcgtaaacttgttgacatcttcagtatc
ttgagcaaagatgcagcaatgcaaaacgagaaagatctcggagatgtcgaagacttagtc
acctcaaaggctccttcaagaaaagggcataggcctatagttcatagttatgaaataaat
aaagaaaactatccaactaaacaatcttttatgggagctgagcagcagcaaaatggtgct
gcgtgcaggtcaaatgaaccactcatgtcgctgaagaaaagcaatgcctctgccgaagtt
attgacagaaatattgattatcaaggatggcttgatgttaaaaagagaaaatggagagaa
acccgtgagcaaaagaagagacgcagaataggttttggtgattcaaagttatctgcctcc
atgttcaatcgtacacatgacaagggtaggaatcgttttacttcatttttcaagagccat
gagttggctcttgttagatcccattggcagataatacaaattgttgcaacccaacagcct
gggctcttttttgcatgggttgttgcagacgggttgatggtcaaggtcccaatgaatgtc
ccaagggtgttctatctcaacaccagagcacctattacagaagaatttcctggaagacgt
gttaaaaagattcttcctcatagaaaaccttgttataatctcattgaggtagtaataaat
gaagatcaattcagggctgaaagcaagaagcttgcagctcacttggcagacccggaagtt
gagggaatatatgaaacaaagatatcactagagttcaatgcaatccttcagattggctgt
gtgtgcaaggtgaaaaaaactgcaaaagtccgaaatgttcatgatgtatggaatctgact
gagctgcagatgaagactacagctgaatactcttatctggaacacgcaatttcctttttc
tatctgtaccacagctcatctgatggaagggctatctatgttctatactttcctgtcact
ttgacaatatatgccgttgttattaatcctttccaaaataaagaattgtcttcagcactt
cttgagaagcaattccgtgaagcttgccagatgatgtcccttgaacctccacaacgtgga
aatgctacattcaaggttgaatacttcagattgaatgatgctggtattaagtttttgcaa
aagactttaactgactacaggcatcagcatcctggacctgctattggtgtcatagaatgt
ccgaacattcaagttataacatcagcgatacgagctttggatgactttccatatgttggc
attccttgcaatactcgggacagcaattatcaggctcttggctggcaagtcacagccggc
aaaacaagtatgcaaaggtgtgctgcatcatcccagtggttcaatgaacgaattatgttg
tctagatatgcacatgtgcctctgggaaactttgaactcgactggcttctgtatactgct
gacgtctttttctctagggcattaagagatcagcagcagattctttggatatctgatgat
ggcattccagacataggaggcatatatcagggagatacttgctttgctgatgaagtcaac
caaccagctcttacttatcccggggcctatagaagggtggcagttgaactgaagatacat
cacttggctgttaatgctctcttgaaaagcagccaagtggatgaactagaaggcggaact
ctttttggatatgaccatgacacgcctcatgctactgaaactgattttgacaatgctagt
tcttgtgcacctgcatttcaagtactaaagcaactaatacagagatgtatctcagatgca
gtaacttctggaaatgtgtttgctgatgcaatacttcagcatctttaccgctggctttgc
agcccactgtcaaaactacatgacccctctcttcatcaagttctgtacaatgtcatgaga
aaggtgttcgctttacttctagcagagcttcgaaagttaggtgctacaattatctttgca
agcttctctaggattattatagacacagggaagatagacttgccagcggctcatgcttac
tgtgattgcttactgaaaacattacaaacaagggatctttttgagtggattgagctggaa
cctctgcactactggcatgcattactgttcatggatcagtataactacggaggaatccag
gctaaaaccccgactggtcctgctgacaatgttgctgatagatctcaagtggacattgtt
tctagctggaatatagcagagtatttgcccaaagccactcaggatcattttgtcttgatt
gtatccgaattcttgtatatcccttggaaattcttagacgaacaagttgccgctcggacc
actttaattgatggcagcagttgtactccatcaatcactgttacagctgctgagactctt
gaagcttctgtcacgggatatcttaaagaccagatcagcaattactttaccgagaagctt
ctcaggattgtatgtgatatacttcaccacttcaagggaaagaacaaaatggagggcgat
gaaacttcaaatcctggttcatctaaaccgctcgattcccaagtacataaaggagatgct
gcactagagtttatcaagcacgtttgtgctgttcttgctctcgaccagaatgtacaacat
gatattctgaggatgaggaagaatctgttgaaattggttcgggtgaaagagtttgctcca
gaagcacagtttcgtgacccctgcccatcattcactcttcccaatgtgatttgtagttat
tgcaacgactgtcgcgacctcgatctctgccgtgacccgactctgctagatcaggagtgg
cggtgtgcggtcccgcaatgcgggcaaccgtacgaccgcgagcagatggagaacacgctc
ctccagatagttcgccagagagagcggctttaccaccttcaggacctggtctgcgtccgt
tgcaggcaggtcaaggcggcgcacttggcagaccagtgtgtgtgcggtggctccttcaga
tgtacggaggatgcttttgagttcctcaacaaaatgcgggtctttttgaatgttgcgaac
caccaagggttccgcctgctgcaagactgcacatcatggattttagaagtcagatga
DBGET
integrated database retrieval system
