Ananas comosus (pineapple): 109727124
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Entry
109727124 CDS
T12126
Symbol
LOC109727124
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
acss
Ananas comosus (pineapple)
Pathway
acss03420
Nucleotide excision repair
acss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109727124 (LOC109727124)
09124 Replication and repair
03420 Nucleotide excision repair
109727124 (LOC109727124)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
acss03051
]
109727124 (LOC109727124)
03400 DNA repair and recombination proteins [BR:
acss03400
]
109727124 (LOC109727124)
Proteasome [BR:
acss03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
109727124 (LOC109727124)
DNA repair and recombination proteins [BR:
acss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109727124 (LOC109727124)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_Ucp12
CUE
UBA_3
Dsc3_N
UBA_RAD5A
TECR_N
Crinkler
Rad60-SLD_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
109727124
NCBI-ProteinID:
XP_020112616
UniProt:
A0A6P5GVE2
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Position
LG2:complement(14555200..14561915)
Genome browser
AA seq
407 aa
AA seq
DB search
MKIFVKTLKGSNFEIEVKPKDTVADVKMIIETNQGQNVYPADQQMLIHQGKVLKDDTTLD
DNKISENSFIVIMLSKGKGTSSGASSVSTAPSTQRKSLSTGAAPTVPANEPPPTSTVPPV
PSTTASATTQAPAATLQPPPASAPTPTATAAPAPAVSVSTEVDAYGQAASNLIAGGKLEQ
TIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPENVEAPPAARAPASGQPAN
PSVQASQQPQPAVPSSGPNANPLDLFPQGLPSFPSNAAGSLDMIRNSPQFRNLLTLVQAN
PQILQPMLQELGKQNPQILRLIQENQAEFLRLINEPAEGAEGDLLGRLAGEIPQALQVTP
QDREAIERLEAMGFDRQLVLEVFFACNRNEELAANYLLDHMHEFEEQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtgaagacgctgaagggttcgaacttcgagatcgaagtgaagcccaaa
gacacggttgccgatgtgaaaatgattattgagactaatcaaggccagaatgtgtaccca
gccgatcagcaaatgctcatacatcaagggaaagttctaaaggatgataccacattggat
gataataaaatttctgaaaatagttttatcgttataatgttgtcaaagggtaagggcaca
tcgagcggagcttcatccgtgtccactgcaccttcaactcagaggaagagcttatccact
ggggctgcaccaactgtgcccgctaatgagccgccccctactagtacggtacctcctgtc
ccttcaacaacggcatcagcaacaactcaagcaccggcagcaactttgcaaccgccacct
gcaagtgcacctactccaactgccacagctgcccctgctcctgctgtcagtgtatccact
gaagttgatgcatatggtcaagccgcttcaaatctcattgcaggcggcaagttggaacaa
actatccaacaaattcttgacatgggtggggggacatgggacagagacactgttgttcgt
gctcttcgtgcggcatacaacaaccctgagagagctgttgaatatctatattctggtatt
cctgagaatgttgaagcacctcctgctgctagagcgcctgcaagtggccaaccagctaat
ccctcagttcaagcttcgcaacaacctcaacccgcagttccttccagtgggcccaatgcc
aatccgctggacctctttcctcagggtcttccaagttttccatcaaatgccgcaggcagc
cttgatatgatacgcaatagtccccagttccgaaacttgctgacgctagtgcaggctaat
cctcagatcctacagccaatgcttcaagaactcggaaaacaaaatcctcagattttgcgg
ctgattcaggaaaatcaagctgagtttctgcggctgattaatgaacctgctgagggagca
gagggggatttactaggtcggttagcaggtgaaataccacaagccctacaagttactcca
caggaccgagaagccatcgagcgtcttgaagcaatgggctttgaccgtcaactggttttg
gaggtgttctttgcctgcaacaggaatgaggagttggccgcaaactatcttctggatcac
atgcacgagttcgaagaacaatga
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integrated database retrieval system
