Aspergillus clavatus: ACLA_001850
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Entry
ACLA_001850 CDS
T01148
Name
(RefSeq) TFIIH complex helicase Ssl2, putative
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
act
Aspergillus clavatus
Pathway
act03022
Basal transcription factors
act03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACLA_001850
09124 Replication and repair
03420 Nucleotide excision repair
ACLA_001850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
act03021
]
ACLA_001850
03400 DNA repair and recombination proteins [BR:
act03400
]
ACLA_001850
Enzymes [BR:
act01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACLA_001850
Transcription machinery [BR:
act03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACLA_001850
DNA repair and recombination proteins [BR:
act03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACLA_001850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
DUF4677
Motif
Other DBs
NCBI-GeneID:
4708636
NCBI-ProteinID:
XP_001276200
UniProt:
A1C506
LinkDB
All DBs
AA seq
823 aa
AA seq
DB search
MPPKRKATDSGRSSRASKRATPVPDAQDVGSSDEYSDYVDEKEGNLKDVVSKFSLESFSN
KKNPAITRQDPNFGYKDFSSLDLKPDHANRPLWIDPLKGTITLESFSPLAPQAQDFLTTI
AEPLSRPTHLHEYRLTGNSLYAAVSVGLQPADIINFLDRLSKTPLPETIKSFIVDFTKSY
GKIKVVLKHNRFFVESTDPAMLQMLLQDEVIGQQRVNESEGITQQAAPKMGGLVIPGTKD
AAGVKQTSEQKPTNGVPSQDRQDEDILMAIRDDDDDDEQAQVHSFEIPNEAVESVKARCQ
AMGCPALEEYDFRNDEINPTLDIDLKPNARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAG
KTLVGITAACTIKKGTIVLCTSSMSVVQWRNEFLRWSNIDPGDVAVFTSDNKEKFRRSTG
IIVSTYSMVSQTRARSHDAQKMMDWIQSREWGLMILDEVHVVPASMFRKVTSAIATQAKL
GLTATLLREDDKIKDLNFLIGPKLYEANWMELAEQGHIAKVQCAEVWCPMTTEFYSEYMR
EKSRKAALLYIMNPRKFQACQFLIDYHEKRGDKVIVFSDNVYALERYARKLNKAYIYGGT
PQNERMRILENFQHNEQVNTIFLSKIGDTSLDLPEATCLIQISSHYGSRRQEAQRLGRIL
RAKRRNDEGFNAFFYSLVSKDTDEMFYSSKRQAFLVDQGYAFKVITHLQGIENLEGLAFA
TPAERRELLQEVMLQNETSAEVENVMDDLFSERSGGFKGKAKGGVRRSAATLSGLAGGED
MAYIEYNRSRNKQLKDKAGHHPLFRKMERERLKRKKELQDFMR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaacgcaaagcgacagacagcggtcggtccagcagggcatcgaaacgggcg
acccctgtaccggacgctcaggacgtcggcagcagtgatgaatactcggactatgtggat
gagaaagagggtaatctgaaagatgtcgtgagcaaattctccctcgaatctttcagtaac
aagaagaaccctgcgatcacaagacaagatccgaacttcggctacaaagatttctcatcg
ctcgatttgaaaccggatcatgcgaaccgtccgttgtggatcgatccgctgaaaggcacg
atcaccttagagagtttctccccgctcgctccgcaggcacaggactttttgactacgatt
gccgagccattgtcgcgcccgacgcacttgcacgaatatcggttgactggaaacagcttg
tatgctgcagtctctgttggcctgcagcctgctgatatcatcaatttccttgaccggtta
tcgaagacgccgctgccagagaccatcaagtcgtttatcgttgacttcaccaagtcctat
ggaaagatcaaggtcgtcctcaaacacaaccgcttttttgtggaaagtacggatccggcg
atgctacagatgcttcttcaggatgaggtgatcgggcagcaaagagtcaacgagtcggag
ggcatcactcaacaagcagcacccaaaatgggtggattggttattcctggaaccaaagat
gctgcgggcgtgaaacagacatccgagcaaaagccaacaaacggtgttcccagtcaggat
cgtcaggacgaagatatccttatggcgatacgagacgatgatgacgacgatgaacaggct
caagtgcacagtttcgagatccccaatgaagcggtagaatcagtcaaagctcgctgccag
gccatgggctgcccggcgcttgaagagtatgatttccggaacgatgagatcaacccgacc
ttggatatcgatttgaaacccaatgcacgaatccgaagctaccaggagaagagtctgagc
aaaatgtttggtaacgggcgggcgaagagcggtatcattgtgttgccatgtggtgcggga
aagactctggttggtatcacggctgcctgcacaatcaagaagggaactattgtcctctgc
acgagctccatgtcggtcgtacaatggcgaaatgagttcttgcggtggtccaatatcgat
cctggcgatgttgcggtttttacttcggacaacaaagagaaattccgcagatcgaccggt
attatcgtctcgacgtattccatggtgtctcaaacgcgagctcgctcgcacgacgctcag
aagatgatggattggattcaatcgcgcgaatggggtctcatgatcctggacgaggtgcac
gtcgtcccggcatctatgttccgaaaagtcacttcggctatcgcgacccaggccaagctt
ggtttgacggccaccctgttgcgtgaagacgacaagatcaaagatttgaactttctgatt
ggccccaagctctacgaagccaattggatggagcttgctgaacaaggtcatattgccaag
gtccagtgcgccgaggtgtggtgtccgatgacaaccgagttctattcagaatacatgaga
gagaagtcaagaaaagcggccctgctctacattatgaatcctcggaagttccaggcctgc
cagttcctgattgactaccacgagaaacgaggcgataaggtaattgtcttttcggacaac
gtgtacgccctggaacggtacgcgcgcaaattgaataaagcttatatctatggcggtacc
cctcagaacgagcgtatgcgtatcctggagaactttcagcacaacgagcaagtcaacacc
atttttctgtccaaaattggagatacatctttggatttgccggaagcgacatgtctgatc
cagatatcttcacactatggttctcgtcgtcaggaggcacagcgtctcggtcggatcctc
agagccaaacgccgaaacgacgaaggtttcaatgctttcttctactctctcgtgtccaaa
gacaccgatgaaatgttttactcgtcaaagcggcaggctttcctcgttgaccaaggctat
gcattcaaagtgattacccaccttcaaggcatcgagaacctagaaggtcttgcatttgct
acccccgcggaacgtcgggagctcctgcaggaagtcatgttgcagaacgagacttctgcc
gaagttgagaatgtcatggacgatctcttttcggagcgctccggtggcttcaagggtaaa
gccaagggtggtgttcggcggagcgcagccactcttagtggattggctggcggcgaggac
atggcttatattgagtacaacagaagtcgaaacaagcagttgaaggacaaggcgggccac
caccccttgttccggaagatggagcgggagcgcctgaagaggaagaaggagctccaggat
ttcatgcgatga
DBGET
integrated database retrieval system
