Aspergillus clavatus: ACLA_002740
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Entry
ACLA_002740 CDS
T01148
Name
(RefSeq) eukaryotic translation initiation factor eIF-4A subunit, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
act
Aspergillus clavatus
Pathway
act03013
Nucleocytoplasmic transport
act03015
mRNA surveillance pathway
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_002740
09122 Translation
03013 Nucleocytoplasmic transport
ACLA_002740
03015 mRNA surveillance pathway
ACLA_002740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_002740
03041 Spliceosome [BR:
act03041
]
ACLA_002740
03009 Ribosome biogenesis [BR:
act03009
]
ACLA_002740
03012 Translation factors [BR:
act03012
]
ACLA_002740
Enzymes [BR:
act01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACLA_002740
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
ACLA_002740
mRNA cycle factors
Stress granule specific factors
ACLA_002740
Spliceosome [BR:
act03041
]
Complex C
Other components
EJC/TREX
ACLA_002740
Ribosome biogenesis [BR:
act03009
]
Eukaryotic type
90S particles
Helicases
ACLA_002740
Translation factors [BR:
act03012
]
Eukaryotic type
Initiation factors
eIF-4
ACLA_002740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA_22
TniB
Flavi_DEAD
UvrD-helicase
COG4_N
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
4708510
NCBI-ProteinID:
XP_001276289
UniProt:
A1C595
LinkDB
All DBs
AA seq
399 aa
AA seq
DB search
MADGIDRRNDDRLEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQIC
KGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVIMALGDYM
NVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQ
YFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGR
KGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLLS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcattgatcgacgaaatgacgacaggctggagttcagcacctcgaaggag
gtgacagtcgccccgaccttcgaggatatgcacctgaaggaaagtttgcttcgcggtatt
tatgcatacggttacgagtcgccatccgctgtccagtctcgcgccattgtccagatctgc
aaaggccgcgacacgatcgctcaggcgcagtccggtactggtaaaaccgctacattctcg
atcagtatcctccaagtcattgatacggctgtacgcgaaactcaggctcttgtcctttcc
cccactcgtgaacttgcgactcagattcagtccgttatcatggccctgggtgactacatg
aacgtccaatgccacgcttgtattggaggcacaaacattggagaagatattcgcaagctg
gattacggtcaacacgttgtttcgggcactccaggcagagtcgcagatatgatccgcaga
cgccacctccgtactcgtcacatcaagatgctggtcctcgacgaggctgacgaactgttg
aaccgtggtttccgcgaacaaatctacgatgtctaccgctaccttcctcccgctacccaa
gttgttgtcgtttccgctaccctcccctacgatgtcctggacatgacaaccaaattcatg
actgaccctgtgcgcgtcctggtcaagcgtgacgaattgaccctggaaggcatcaagcag
tacttcatcgcggtagagaaagaagagtggaaatttgatactctttgcgacctttacgat
accctgaccatcacccaggccgtgatcttctgcaacacccgccggaaggtagactggctc
accgataagatgcgtgaggccaacttcaccgtatccagcatgcacggcgagatgccccag
aaggaacgtgacagtattatgcaagatttccgccagggtaactcccgtgttctcatctcc
accgatgtttgggcccgtggtatcgacgttcagcaagtctcgctggtcatcaactacgat
ctccccaccaaccgtgaaaactacatccaccgtatcggccgaagcggtcgtttcggacgc
aagggtgtcgccatcaacttcgtcaccagcgatgacgtgcggatcctgcgtgacattgaa
ttgtactactccacacagatcgatgagatgcccatgaacgttgccgatctcctttcgtaa
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integrated database retrieval system
