Aspergillus clavatus: ACLA_013770
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Entry
ACLA_013770 CDS
T01148
Name
(RefSeq) topisomerase II associated protein (Pat1), putative
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
act
Aspergillus clavatus
Pathway
act03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACLA_013770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_013770
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACLA_013770
mRNA degradation factors
5'-3' decay
Decapping complex
ACLA_013770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Mug135_C
Motif
Other DBs
NCBI-GeneID:
4706267
NCBI-ProteinID:
XP_001274366
UniProt:
A1CB22
LinkDB
All DBs
AA seq
826 aa
AA seq
DB search
MSFFGFDTTLPRDRLPPGDKRGFFEAPDPFAEIARAGAGHPGNDDDDAIDFEDTYDGLGD
QLDDDQDAFNDDTFGEGGPTAVGKDFDFFGKTARVADAIGEEQVRYNLQHPQAAPAGIAN
ETAAQPPAASIAVEKPKRTGYEKYQDPGYIPDLQAKSSVWGLQKKPDAMPEPMSQAKKML
SLEEVEAQLRGHGILPGQLPVSLPMGMPDLAHLQRAQQLPGLPEAFAQLPPEFLQAQFAK
GMPPAQLLHHPAAMVPEPYPLPPNAPNLPLHLLQNANIPPQHMTPPQRHAMPPLAQQPQP
QPQPQPQQQPPPRRTSRGAAAGLPLITNPQQLMQLTEEQRMAYLMEDAKRAKRNHKIFLL
SKGNGLMTPQDKNFITRIQLQQLVAAAGNVADADSEAVLAEDFYYQVYSQIRGAPRQHPH
QPLGHFAQTYLLQTGNRIGGHGRKNLQSADNHMQRMQQQVQRAVEAAKAKPKNKQLIIEG
SLGKISFSNAKAPRPTLNIKRPDTSEGTKVAKKQQTDLSLSDRKSILMNIESVYSTLMEM
EDMERTMPPPPDENDAEAIQKHMEWRQKIRSLNQKLWHDLKVMEPIVPNTSTPHPFIAFL
SYPKGKKAIPRIFRHIDQEQRVTILTMIVVHLDTLDVVRNAQPVPGETQPSLAVREAIDL
FSQAVMPSLLGYVNEAPFNIIIGLLGLVIAQTHVQLVAKTRVGLGVLTMLLSRAEIVKEA
GQAAERDWQQWVEKFNVLFDTLEPIFGDIFPASINAGDDMYVWQFLAAVGIGASPEQQQR
LVIAVKDRVMETVTYSKTLPADMASQRLGNVNLFMRAIGLDVELLG
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcttcggctttgatactaccctgccgagggatagacttcccccgggagacaaa
agggggtttttcgaggctcctgatccgtttgccgaaatcgctcgtgctggagcaggacac
ccgggcaacgacgacgacgatgctatcgattttgaggacacctacgatggtctaggagat
cagctagacgatgaccaggatgccttcaacgacgatacctttggtgaaggcggtcccacc
gcggtgggcaaggattttgacttcttcggaaagaccgctcgagttgcagatgctattggg
gaggagcaggttcgctataatctgcagcacccccaggctgctcctgcaggcatcgccaat
gagacagctgcccaacccccggcggcgagtatcgcagtcgagaaaccgaagcgtaccggc
tacgaaaaataccaggatccaggatatatccccgacctgcaggccaagtcgagcgtttgg
ggtctacagaagaaaccagacgctatgccggagcccatgtcacaggccaagaagatgttg
agcttggaggaagtggaggcccagctgcgcgggcacggtatcttgccaggccagcttccg
gtttccctgccgatggggatgcctgatcttgcgcaccttcagcgggcccaacagctcccc
gggctccctgaagccttcgcacagttgccaccggagtttctccaggcccagttcgcgaaa
gggatgccaccggcgcagctgctgcaccatccagcagccatggtccccgagccatatcct
cttccacccaatgcacccaatctgccgttgcatctcctacagaacgccaatattccaccg
caacacatgacccctccgcaacgccatgcaatgcctccactagcgcagcaaccccagccc
cagccacaaccacaaccccagcagcagcccccaccacggcggacttcgcgaggtgcggct
gccggtcttccgctaattacgaaccctcagcaactgatgcagctgactgaagaacagcgg
atggcttatctcatggaggatgcgaagcgggccaagcgcaaccacaagatatttctcctc
tcaaagggcaatggcctaatgacgcctcaagataagaacttcatcacacggattcagtta
cagcagctggtagcagccgcaggcaatgttgcggatgccgactccgaggctgtcttggcg
gaagacttctactatcaggtctacagccagattcggggcgcaccccggcaacatcctcac
cagcccctgggccattttgcgcaaacctacctccttcagacgggtaaccgaatcggaggc
catggacggaagaacctccagagtgctgataaccacatgcagcggatgcagcaacaggtg
cagcgcgcggtcgaagcagcgaaagcgaaacccaagaacaagcagctaatcattgaaggc
agcttgggcaaaatttctttcagcaatgcaaaggcgccgaggccgacactcaacatcaaa
cgtcctgacacttcagagggaaccaaggtggccaaaaagcagcaaactgatctgagcctc
agcgaccgaaagtctattctgatgaacatcgagagtgtgtacagcactttgatggagatg
gaagacatggaacgtacgatgcctcctccgccggatgagaatgatgcggaggctatccag
aaacacatggagtggcggcagaagattcgatcattgaaccagaaattgtggcatgatctc
aaggtcatggagcccattgttcccaataccagtaccccacatccgtttatcgcattcctt
tcttatcccaagggcaagaaagccattccccgtatctttcggcacatcgatcaggaacaa
cgggtcacgattctcaccatgattgttgtccacctggacaccttggacgttgtccgaaac
gcacagcctgttcccggcgagacccagccgtcgcttgccgttcgggaggccattgatttg
ttctcgcaggctgtgatgcccagtctgttgggttatgtgaacgaggcgccattcaacatc
atcatcgggcttctggggctcgtgattgcacagacccatgtgcaactggtggccaagaca
cgcgttggtctgggagttctgaccatgttgctcagccgtgccgaaattgtcaaggaagca
ggacaggcggcggaacgggattggcaacaatgggttgaaaagttcaatgtgttgttcgac
actctggagccgatctttggcgacattttccccgcgtcgatcaacgctggtgacgacatg
tatgtatggcaattcctggcggcggttggtattggggccagcccagaacagcagcagcgc
ttggtcatcgccgtgaaggaccgcgtgatggaaacggtcacatacagcaagactctaccc
gccgacatggccagtcagcgtctcggcaatgtgaacctcttcatgcgtgccattggcctt
gatgtggaattgcttggctag
DBGET
integrated database retrieval system
